Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CSF1P09603 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CSF1P09603 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CSF1P09603 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CSF1P09603 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CSF1P09603 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CSF1P09603 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CSF1P09603 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSF1P09603 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CSF1P09603 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSF1P09603 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSF1P09603 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSF1P09603 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CSF1P09603 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.42■□□□□ 0.06
CSF1P09603 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSF1P09603 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSF1P09603 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSF1P09603 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSF1P09603 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.42■□□□□ 0.06
CSF1P09603 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSF1P09603 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSF1P09603 MIR1238-201ENST00000408483 83 ntBASIC15.42■□□□□ 0.06
CSF1P09603 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
CSF1P09603 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSF1P09603 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.42■□□□□ 0.06
CSF1P09603 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.42■□□□□ 0.06
CSF1P09603 AP000525.1-201ENST00000608286 694 ntBASIC15.42■□□□□ 0.06
CSF1P09603 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSF1P09603 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSF1P09603 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSF1P09603 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CSF1P09603 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSF1P09603 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSF1P09603 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.42■□□□□ 0.06
CSF1P09603 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CSF1P09603 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSF1P09603 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CSF1P09603 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
CSF1P09603 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CSF1P09603 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSF1P09603 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSF1P09603 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
CSF1P09603 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSF1P09603 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSF1P09603 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSF1P09603 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.41■□□□□ 0.06
CSF1P09603 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CSF1P09603 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSF1P09603 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
CSF1P09603 LINC01568-207ENST00000641790 1380 ntBASIC15.41■□□□□ 0.06
CSF1P09603 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.41■□□□□ 0.06
CSF1P09603 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CSF1P09603 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CSF1P09603 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.41■□□□□ 0.06
CSF1P09603 NAPSB-206ENST00000562112 1266 ntBASIC15.41■□□□□ 0.06
CSF1P09603 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.41■□□□□ 0.06
CSF1P09603 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.41■□□□□ 0.06
CSF1P09603 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.41■□□□□ 0.06
CSF1P09603 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.41■□□□□ 0.06
CSF1P09603 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CSF1P09603 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CSF1P09603 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CSF1P09603 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CSF1P09603 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSF1P09603 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSF1P09603 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.41■□□□□ 0.06
CSF1P09603 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSF1P09603 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.41■□□□□ 0.06
CSF1P09603 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CSF1P09603 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.41■□□□□ 0.06
CSF1P09603 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.41■□□□□ 0.06
CSF1P09603 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSF1P09603 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSF1P09603 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSF1P09603 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSF1P09603 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSF1P09603 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.4■□□□□ 0.06
CSF1P09603 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSF1P09603 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSF1P09603 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSF1P09603 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSF1P09603 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
CSF1P09603 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
CSF1P09603 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSF1P09603 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSF1P09603 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CSF1P09603 MIR564-202ENST00000385049 94 ntBASIC15.4■□□□□ 0.06
CSF1P09603 AC005521.1-201ENST00000393351 872 ntBASIC15.4■□□□□ 0.06
CSF1P09603 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.4■□□□□ 0.06
CSF1P09603 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.4■□□□□ 0.06
CSF1P09603 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.4■□□□□ 0.06
CSF1P09603 REXO1L10P-201ENST00000615707 1290 ntBASIC15.4■□□□□ 0.06
CSF1P09603 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSF1P09603 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CSF1P09603 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSF1P09603 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSF1P09603 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.4■□□□□ 0.06
CSF1P09603 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSF1P09603 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSF1P09603 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms