Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
MMP3P08254 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP3P08254 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
MMP3P08254 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP3P08254 CRYGEP-201ENST00000412192 528 ntBASIC19.59■□□□□ 0.73
MMP3P08254 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.59■□□□□ 0.73
MMP3P08254 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.59■□□□□ 0.73
MMP3P08254 RPS8P6-201ENST00000426177 609 ntBASIC19.59■□□□□ 0.73
MMP3P08254 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP3P08254 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.59■□□□□ 0.73
MMP3P08254 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.59■□□□□ 0.73
MMP3P08254 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
MMP3P08254 MIR4751-201ENST00000578027 74 ntBASIC19.59■□□□□ 0.73
MMP3P08254 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.59■□□□□ 0.73
MMP3P08254 AP001160.2-201ENST00000596071 487 ntBASIC19.59■□□□□ 0.73
MMP3P08254 MTDHP5-201ENST00000598980 586 ntBASIC19.59■□□□□ 0.73
MMP3P08254 AC008667.4-201ENST00000607370 168 ntBASIC19.59■□□□□ 0.73
MMP3P08254 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.59■□□□□ 0.73
MMP3P08254 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP3P08254 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.59■□□□□ 0.73
MMP3P08254 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP3P08254 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP3P08254 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.59■□□□□ 0.73
MMP3P08254 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP3P08254 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP3P08254 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP3P08254 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.59■□□□□ 0.73
MMP3P08254 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP3P08254 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP3P08254 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.59■□□□□ 0.73
MMP3P08254 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP3P08254 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP3P08254 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP3P08254 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP3P08254 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
MMP3P08254 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
MMP3P08254 AC098818.2-201ENST00000564925 2320 ntBASIC19.58■□□□□ 0.73
MMP3P08254 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MMP3P08254 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.58■□□□□ 0.73
MMP3P08254 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MMP3P08254 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.58■□□□□ 0.73
MMP3P08254 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.58■□□□□ 0.73
MMP3P08254 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.58■□□□□ 0.73
MMP3P08254 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MMP3P08254 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.58■□□□□ 0.72
MMP3P08254 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.58■□□□□ 0.72
MMP3P08254 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MMP3P08254 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.58■□□□□ 0.72
MMP3P08254 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
MMP3P08254 IGHV3-52-201ENST00000519770 353 ntBASIC19.58■□□□□ 0.72
MMP3P08254 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.58■□□□□ 0.72
MMP3P08254 AC134684.3-201ENST00000641758 218 ntBASIC19.58■□□□□ 0.72
MMP3P08254 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP3P08254 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MMP3P08254 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
MMP3P08254 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP3P08254 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MMP3P08254 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
MMP3P08254 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.58■□□□□ 0.72
MMP3P08254 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP3P08254 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
MMP3P08254 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.58■□□□□ 0.72
MMP3P08254 AP000997.3-201ENST00000623333 2250 ntBASIC19.58■□□□□ 0.72
MMP3P08254 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP3P08254 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
MMP3P08254 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MMP3P08254 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MMP3P08254 AC009336.1-201ENST00000608941 1553 ntBASIC19.57■□□□□ 0.72
MMP3P08254 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP3P08254 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP3P08254 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.57■□□□□ 0.72
MMP3P08254 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.57■□□□□ 0.72
MMP3P08254 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP3P08254 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
MMP3P08254 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.57■□□□□ 0.72
MMP3P08254 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.57■□□□□ 0.72
MMP3P08254 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
MMP3P08254 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP3P08254 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP3P08254 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.57■□□□□ 0.72
MMP3P08254 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP3P08254 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.57■□□□□ 0.72
MMP3P08254 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MMP3P08254 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.57■□□□□ 0.72
MMP3P08254 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP3P08254 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.57■□□□□ 0.72
MMP3P08254 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.57■□□□□ 0.72
MMP3P08254 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP3P08254 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.57■□□□□ 0.72
MMP3P08254 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.57■□□□□ 0.72
MMP3P08254 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.57■□□□□ 0.72
MMP3P08254 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.57■□□□□ 0.72
MMP3P08254 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
MMP3P08254 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP3P08254 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MMP3P08254 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP3P08254 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MMP3P08254 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MMP3P08254 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP3P08254 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms