Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL5A2P05997 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL5A2P05997 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.31
COL5A2P05997 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.31
COL5A2P05997 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC23.2■■□□□ 1.31
COL5A2P05997 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
COL5A2P05997 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL5A2P05997 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL5A2P05997 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
COL5A2P05997 HLA-DRB6-201ENST00000411500 1235 ntBASIC23.2■■□□□ 1.3
COL5A2P05997 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC23.2■■□□□ 1.3
COL5A2P05997 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC23.2■■□□□ 1.3
COL5A2P05997 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC23.2■■□□□ 1.3
COL5A2P05997 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL5A2P05997 AQP6-203ENST00000551733 849 ntTSL 3 BASIC23.2■■□□□ 1.3
COL5A2P05997 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC23.2■■□□□ 1.3
COL5A2P05997 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL5A2P05997 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC23.2■■□□□ 1.3
COL5A2P05997 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL5A2P05997 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC23.2■■□□□ 1.3
COL5A2P05997 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC23.2■■□□□ 1.3
COL5A2P05997 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC23.2■■□□□ 1.3
COL5A2P05997 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL5A2P05997 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC23.2■■□□□ 1.3
COL5A2P05997 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.2■■□□□ 1.3
COL5A2P05997 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL5A2P05997 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL5A2P05997 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
COL5A2P05997 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL5A2P05997 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.19■■□□□ 1.3
COL5A2P05997 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL5A2P05997 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL5A2P05997 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC23.19■■□□□ 1.3
COL5A2P05997 AL355306.1-201ENST00000415580 579 ntBASIC23.19■■□□□ 1.3
COL5A2P05997 FALEC-201ENST00000416894 566 ntTSL 3 BASIC23.19■■□□□ 1.3
COL5A2P05997 AC002558.1-201ENST00000488906 803 ntBASIC23.19■■□□□ 1.3
COL5A2P05997 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL5A2P05997 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
COL5A2P05997 AL096828.2-201ENST00000567259 1965 ntBASIC23.19■■□□□ 1.3
COL5A2P05997 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL5A2P05997 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL5A2P05997 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.19■■□□□ 1.3
COL5A2P05997 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL5A2P05997 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL5A2P05997 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL5A2P05997 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL5A2P05997 PI4KAP1-204ENST00000612579 1703 ntBASIC23.19■■□□□ 1.3
COL5A2P05997 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL5A2P05997 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL5A2P05997 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL5A2P05997 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC23.18■■□□□ 1.3
COL5A2P05997 AC244107.1-201ENST00000442033 332 ntBASIC23.18■■□□□ 1.3
COL5A2P05997 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
COL5A2P05997 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC23.18■■□□□ 1.3
COL5A2P05997 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
COL5A2P05997 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL5A2P05997 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL5A2P05997 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.18■■□□□ 1.3
COL5A2P05997 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL5A2P05997 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.18■■□□□ 1.3
COL5A2P05997 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.18■■□□□ 1.3
COL5A2P05997 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC23.18■■□□□ 1.3
COL5A2P05997 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.18■■□□□ 1.3
COL5A2P05997 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL5A2P05997 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL5A2P05997 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL5A2P05997 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
COL5A2P05997 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL5A2P05997 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL5A2P05997 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC23.17■■□□□ 1.3
COL5A2P05997 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL5A2P05997 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC23.17■■□□□ 1.3
COL5A2P05997 IGHV3-52-201ENST00000519770 353 ntBASIC23.17■■□□□ 1.3
COL5A2P05997 AC112191.1-201ENST00000523689 701 ntBASIC23.17■■□□□ 1.3
COL5A2P05997 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC23.17■■□□□ 1.3
COL5A2P05997 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL5A2P05997 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL5A2P05997 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC23.17■■□□□ 1.3
COL5A2P05997 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
COL5A2P05997 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL5A2P05997 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
COL5A2P05997 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL5A2P05997 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC23.17■■□□□ 1.3
COL5A2P05997 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC23.17■■□□□ 1.3
COL5A2P05997 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL5A2P05997 CYP51A1P2-201ENST00000419457 1499 ntBASIC23.17■■□□□ 1.3
COL5A2P05997 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL5A2P05997 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL5A2P05997 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC23.17■■□□□ 1.3
COL5A2P05997 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.17■■□□□ 1.3
COL5A2P05997 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL5A2P05997 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL5A2P05997 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL5A2P05997 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL5A2P05997 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC23.17■■□□□ 1.3
COL5A2P05997 AC069262.1-201ENST00000539058 672 ntBASIC23.17■■□□□ 1.3
COL5A2P05997 DUT-210ENST00000559935 569 ntTSL 3 BASIC23.17■■□□□ 1.3
COL5A2P05997 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL5A2P05997 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC23.17■■□□□ 1.3
COL5A2P05997 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms