Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 LINC00982-205ENST00000420957 435 ntBASIC20.16■□□□□ 0.82
ALDH1A1P00352 AC069335.1-201ENST00000489972 472 ntBASIC20.16■□□□□ 0.82
ALDH1A1P00352 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.16■□□□□ 0.82
ALDH1A1P00352 STK25P1-201ENST00000585406 838 ntBASIC20.16■□□□□ 0.82
ALDH1A1P00352 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.16■□□□□ 0.82
ALDH1A1P00352 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ALDH1A1P00352 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALDH1A1P00352 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.16■□□□□ 0.82
ALDH1A1P00352 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALDH1A1P00352 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ALDH1A1P00352 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALDH1A1P00352 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALDH1A1P00352 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALDH1A1P00352 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ALDH1A1P00352 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ALDH1A1P00352 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ALDH1A1P00352 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
ALDH1A1P00352 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ALDH1A1P00352 COX11-202ENST00000571584 1108 ntTSL 2 BASIC20.15■□□□□ 0.82
ALDH1A1P00352 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.15■□□□□ 0.82
ALDH1A1P00352 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.15■□□□□ 0.82
ALDH1A1P00352 AC019129.2-201ENST00000609837 1235 ntBASIC20.15■□□□□ 0.82
ALDH1A1P00352 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ALDH1A1P00352 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
ALDH1A1P00352 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.15■□□□□ 0.82
ALDH1A1P00352 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.15■□□□□ 0.82
ALDH1A1P00352 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ALDH1A1P00352 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.15■□□□□ 0.82
ALDH1A1P00352 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
ALDH1A1P00352 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ALDH1A1P00352 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALDH1A1P00352 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALDH1A1P00352 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
ALDH1A1P00352 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.14■□□□□ 0.82
ALDH1A1P00352 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ALDH1A1P00352 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.14■□□□□ 0.81
ALDH1A1P00352 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.14■□□□□ 0.81
ALDH1A1P00352 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A1P00352 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.14■□□□□ 0.81
ALDH1A1P00352 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A1P00352 TUBB3P1-201ENST00000405796 1332 ntBASIC20.14■□□□□ 0.81
ALDH1A1P00352 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A1P00352 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.14■□□□□ 0.81
ALDH1A1P00352 MIR943-201ENST00000401286 94 ntBASIC20.14■□□□□ 0.81
ALDH1A1P00352 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.14■□□□□ 0.81
ALDH1A1P00352 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.14■□□□□ 0.81
ALDH1A1P00352 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.14■□□□□ 0.81
ALDH1A1P00352 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.14■□□□□ 0.81
ALDH1A1P00352 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A1P00352 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A1P00352 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A1P00352 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A1P00352 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A1P00352 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A1P00352 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A1P00352 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A1P00352 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A1P00352 AC092919.2-201ENST00000623631 1645 ntBASIC20.13■□□□□ 0.81
ALDH1A1P00352 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A1P00352 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.13■□□□□ 0.81
ALDH1A1P00352 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
ALDH1A1P00352 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A1P00352 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.13■□□□□ 0.81
ALDH1A1P00352 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A1P00352 AL671277.1-201ENST00000429656 993 ntBASIC20.13■□□□□ 0.81
ALDH1A1P00352 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.13■□□□□ 0.81
ALDH1A1P00352 SPDYE11-202ENST00000450699 704 ntBASIC20.13■□□□□ 0.81
ALDH1A1P00352 AL513480.1-201ENST00000451731 511 ntBASIC20.13■□□□□ 0.81
ALDH1A1P00352 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.13■□□□□ 0.81
ALDH1A1P00352 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.13■□□□□ 0.81
ALDH1A1P00352 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A1P00352 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.13■□□□□ 0.81
ALDH1A1P00352 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A1P00352 SPDYE9P-201ENST00000570642 692 ntBASIC20.13■□□□□ 0.81
ALDH1A1P00352 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A1P00352 AC109462.3-201ENST00000573934 613 ntBASIC20.13■□□□□ 0.81
ALDH1A1P00352 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.13■□□□□ 0.81
ALDH1A1P00352 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.13■□□□□ 0.81
ALDH1A1P00352 CECR7-204ENST00000609932 568 ntTSL 2 BASIC20.13■□□□□ 0.81
ALDH1A1P00352 SPDYE10P-202ENST00000612005 668 ntBASIC20.13■□□□□ 0.81
ALDH1A1P00352 SPDYE8P-202ENST00000612377 668 ntBASIC20.13■□□□□ 0.81
ALDH1A1P00352 AL358472.5-202ENST00000641448 1267 ntBASIC20.13■□□□□ 0.81
ALDH1A1P00352 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ALDH1A1P00352 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A1P00352 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A1P00352 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A1P00352 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A1P00352 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.13■□□□□ 0.81
ALDH1A1P00352 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A1P00352 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ALDH1A1P00352 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALDH1A1P00352 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALDH1A1P00352 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALDH1A1P00352 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALDH1A1P00352 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
ALDH1A1P00352 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ALDH1A1P00352 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALDH1A1P00352 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALDH1A1P00352 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.12■□□□□ 0.81
ALDH1A1P00352 AL355306.1-201ENST00000415580 579 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms