Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
LTN1O94822 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
LTN1O94822 AP000997.3-201ENST00000623333 2250 ntBASIC23.38■■□□□ 1.33
LTN1O94822 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC23.38■■□□□ 1.33
LTN1O94822 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC23.38■■□□□ 1.33
LTN1O94822 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
LTN1O94822 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LTN1O94822 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC23.37■■□□□ 1.33
LTN1O94822 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
LTN1O94822 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
LTN1O94822 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC23.37■■□□□ 1.33
LTN1O94822 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LTN1O94822 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC23.37■■□□□ 1.33
LTN1O94822 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LTN1O94822 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
LTN1O94822 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
LTN1O94822 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LTN1O94822 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC23.37■■□□□ 1.33
LTN1O94822 EFTUD1P1-204ENST00000560401 1798 ntBASIC23.37■■□□□ 1.33
LTN1O94822 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LTN1O94822 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC23.37■■□□□ 1.33
LTN1O94822 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
LTN1O94822 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
LTN1O94822 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LTN1O94822 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
LTN1O94822 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC23.37■■□□□ 1.33
LTN1O94822 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
LTN1O94822 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC23.37■■□□□ 1.33
LTN1O94822 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
LTN1O94822 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LTN1O94822 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LTN1O94822 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
LTN1O94822 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
LTN1O94822 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LTN1O94822 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC23.36■■□□□ 1.33
LTN1O94822 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC23.36■■□□□ 1.33
LTN1O94822 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LTN1O94822 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LTN1O94822 LINC00982-205ENST00000420957 435 ntBASIC23.36■■□□□ 1.33
LTN1O94822 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LTN1O94822 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LTN1O94822 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.36■■□□□ 1.33
LTN1O94822 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LTN1O94822 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LTN1O94822 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC23.36■■□□□ 1.33
LTN1O94822 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
LTN1O94822 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
LTN1O94822 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
LTN1O94822 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
LTN1O94822 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
LTN1O94822 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LTN1O94822 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
LTN1O94822 STOM-202ENST00000347359 870 ntTSL 2 BASIC23.35■■□□□ 1.33
LTN1O94822 FAM58CP-201ENST00000435741 640 ntBASIC23.35■■□□□ 1.33
LTN1O94822 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LTN1O94822 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC23.35■■□□□ 1.33
LTN1O94822 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC23.35■■□□□ 1.33
LTN1O94822 AC092902.6-201ENST00000641783 218 ntBASIC23.35■■□□□ 1.33
LTN1O94822 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LTN1O94822 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LTN1O94822 REXO1L9P-201ENST00000604264 2108 ntBASIC23.35■■□□□ 1.33
LTN1O94822 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
LTN1O94822 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC23.35■■□□□ 1.33
LTN1O94822 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
LTN1O94822 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LTN1O94822 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC23.35■■□□□ 1.33
LTN1O94822 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LTN1O94822 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
LTN1O94822 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
LTN1O94822 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LTN1O94822 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LTN1O94822 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.35■■□□□ 1.33
LTN1O94822 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
LTN1O94822 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
LTN1O94822 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC23.35■■□□□ 1.33
LTN1O94822 PTCHD3P3-201ENST00000403073 906 ntBASIC23.35■■□□□ 1.33
LTN1O94822 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC23.35■■□□□ 1.33
LTN1O94822 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC23.35■■□□□ 1.33
LTN1O94822 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC23.35■■□□□ 1.33
LTN1O94822 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC23.35■■□□□ 1.33
LTN1O94822 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC23.35■■□□□ 1.33
LTN1O94822 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LTN1O94822 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LTN1O94822 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
LTN1O94822 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LTN1O94822 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC23.34■■□□□ 1.33
LTN1O94822 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC23.34■■□□□ 1.33
LTN1O94822 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC23.34■■□□□ 1.33
LTN1O94822 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
LTN1O94822 BCAR1-209ENST00000546196 1340 ntBASIC23.34■■□□□ 1.33
LTN1O94822 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
LTN1O94822 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LTN1O94822 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
LTN1O94822 CYP51A1P2-201ENST00000419457 1499 ntBASIC23.34■■□□□ 1.33
LTN1O94822 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.34■■□□□ 1.33
LTN1O94822 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LTN1O94822 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC23.34■■□□□ 1.33
LTN1O94822 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LTN1O94822 CBR1-202ENST00000399191 838 ntTSL 3 BASIC23.34■■□□□ 1.33
LTN1O94822 CEND1P1-201ENST00000451006 455 ntBASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms