Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.86■□□□□ 0.45
GPC4O75487 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.86■□□□□ 0.45
GPC4O75487 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.86■□□□□ 0.45
GPC4O75487 AC083849.1-201ENST00000615227 514 ntBASIC17.86■□□□□ 0.45
GPC4O75487 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GPC4O75487 LINC01311-201ENST00000565162 1445 ntBASIC17.86■□□□□ 0.45
GPC4O75487 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC4O75487 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
GPC4O75487 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
GPC4O75487 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
GPC4O75487 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
GPC4O75487 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC4O75487 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC4O75487 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GPC4O75487 AL096828.2-201ENST00000567259 1965 ntBASIC17.86■□□□□ 0.45
GPC4O75487 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.86■□□□□ 0.45
GPC4O75487 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC4O75487 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.85■□□□□ 0.45
GPC4O75487 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.85■□□□□ 0.45
GPC4O75487 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
GPC4O75487 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
GPC4O75487 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.85■□□□□ 0.45
GPC4O75487 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.85■□□□□ 0.45
GPC4O75487 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.85■□□□□ 0.45
GPC4O75487 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.85■□□□□ 0.45
GPC4O75487 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 SPDYE13P-201ENST00000445314 798 ntBASIC17.85■□□□□ 0.45
GPC4O75487 AL671277.2-201ENST00000458060 996 ntBASIC17.85■□□□□ 0.45
GPC4O75487 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.85■□□□□ 0.45
GPC4O75487 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.85■□□□□ 0.45
GPC4O75487 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.85■□□□□ 0.45
GPC4O75487 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.85■□□□□ 0.45
GPC4O75487 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.85■□□□□ 0.45
GPC4O75487 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.85■□□□□ 0.45
GPC4O75487 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
GPC4O75487 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
GPC4O75487 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC4O75487 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.84■□□□□ 0.45
GPC4O75487 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
GPC4O75487 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC4O75487 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GPC4O75487 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC4O75487 AC093010.1-201ENST00000473625 1624 ntBASIC17.84■□□□□ 0.45
GPC4O75487 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
GPC4O75487 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.84■□□□□ 0.45
GPC4O75487 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
GPC4O75487 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC4O75487 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC4O75487 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.84■□□□□ 0.45
GPC4O75487 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
GPC4O75487 AC113404.2-201ENST00000507884 177 ntBASIC17.84■□□□□ 0.45
GPC4O75487 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.84■□□□□ 0.45
GPC4O75487 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.84■□□□□ 0.45
GPC4O75487 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.84■□□□□ 0.45
GPC4O75487 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GPC4O75487 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC4O75487 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.84■□□□□ 0.45
GPC4O75487 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC4O75487 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GPC4O75487 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GPC4O75487 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.83■□□□□ 0.45
GPC4O75487 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.83■□□□□ 0.45
GPC4O75487 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
GPC4O75487 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.83■□□□□ 0.45
GPC4O75487 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GPC4O75487 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GPC4O75487 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GPC4O75487 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
GPC4O75487 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
GPC4O75487 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
GPC4O75487 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GPC4O75487 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GPC4O75487 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.83■□□□□ 0.44
GPC4O75487 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.83■□□□□ 0.44
GPC4O75487 NTF6B-201ENST00000591913 560 ntBASIC17.83■□□□□ 0.44
GPC4O75487 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.83■□□□□ 0.44
GPC4O75487 AL590326.2-201ENST00000625139 305 ntBASIC17.83■□□□□ 0.44
GPC4O75487 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
GPC4O75487 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GPC4O75487 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GPC4O75487 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms