Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRIM3O75382 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM3O75382 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM3O75382 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.62■□□□□ 0.25
TRIM3O75382 AP002383.4-201ENST00000442518 975 ntBASIC16.62■□□□□ 0.25
TRIM3O75382 AC113404.2-201ENST00000507884 177 ntBASIC16.62■□□□□ 0.25
TRIM3O75382 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
TRIM3O75382 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRIM3O75382 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM3O75382 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRIM3O75382 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM3O75382 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM3O75382 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM3O75382 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM3O75382 HCG4P8-203ENST00000443049 980 ntBASIC16.61■□□□□ 0.25
TRIM3O75382 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM3O75382 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM3O75382 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM3O75382 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM3O75382 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM3O75382 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 AL353692.3-201ENST00000407031 1396 ntBASIC16.61■□□□□ 0.25
TRIM3O75382 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRIM3O75382 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TRIM3O75382 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM3O75382 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM3O75382 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM3O75382 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM3O75382 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM3O75382 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM3O75382 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM3O75382 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM3O75382 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM3O75382 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM3O75382 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM3O75382 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM3O75382 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM3O75382 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.6■□□□□ 0.25
TRIM3O75382 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM3O75382 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
TRIM3O75382 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM3O75382 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM3O75382 MIR3180-1-201ENST00000580374 94 ntBASIC16.6■□□□□ 0.25
TRIM3O75382 MIR3180-3-201ENST00000584616 94 ntBASIC16.6■□□□□ 0.25
TRIM3O75382 AC092119.3-201ENST00000612618 583 ntBASIC16.6■□□□□ 0.25
TRIM3O75382 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM3O75382 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM3O75382 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM3O75382 ESPNP-201ENST00000270691 2015 ntBASIC16.6■□□□□ 0.25
TRIM3O75382 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM3O75382 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM3O75382 LINC01126-201ENST00000623515 1646 ntBASIC16.59■□□□□ 0.25
TRIM3O75382 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM3O75382 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM3O75382 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM3O75382 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM3O75382 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.59■□□□□ 0.25
TRIM3O75382 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM3O75382 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM3O75382 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM3O75382 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM3O75382 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM3O75382 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM3O75382 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM3O75382 KRT18P56-201ENST00000507275 550 ntBASIC16.59■□□□□ 0.25
TRIM3O75382 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM3O75382 AC090616.6-201ENST00000582640 721 ntBASIC16.59■□□□□ 0.25
TRIM3O75382 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.59■□□□□ 0.25
TRIM3O75382 AC004263.2-201ENST00000617183 678 ntBASIC16.59■□□□□ 0.25
TRIM3O75382 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM3O75382 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
TRIM3O75382 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms