Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
HCN1O60741 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.66■□□□□ 0.26
HCN1O60741 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HCN1O60741 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HCN1O60741 NPAP1P7-201ENST00000613027 823 ntBASIC16.66■□□□□ 0.26
HCN1O60741 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HCN1O60741 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.66■□□□□ 0.26
HCN1O60741 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HCN1O60741 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HCN1O60741 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.66■□□□□ 0.26
HCN1O60741 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.66■□□□□ 0.26
HCN1O60741 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HCN1O60741 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HCN1O60741 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
HCN1O60741 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.65■□□□□ 0.26
HCN1O60741 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.65■□□□□ 0.26
HCN1O60741 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.65■□□□□ 0.26
HCN1O60741 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.65■□□□□ 0.26
HCN1O60741 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.65■□□□□ 0.26
HCN1O60741 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.65■□□□□ 0.26
HCN1O60741 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.65■□□□□ 0.26
HCN1O60741 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.65■□□□□ 0.26
HCN1O60741 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HCN1O60741 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HCN1O60741 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.65■□□□□ 0.26
HCN1O60741 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 AC141586.5-201ENST00000624546 2050 ntBASIC16.65■□□□□ 0.26
HCN1O60741 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HCN1O60741 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
HCN1O60741 AC016734.2-201ENST00000624325 1377 ntBASIC16.64■□□□□ 0.26
HCN1O60741 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HCN1O60741 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HCN1O60741 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.64■□□□□ 0.25
HCN1O60741 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.64■□□□□ 0.25
HCN1O60741 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HCN1O60741 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCN1O60741 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCN1O60741 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCN1O60741 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCN1O60741 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HCN1O60741 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCN1O60741 TSPY22P-201ENST00000427496 604 ntBASIC16.64■□□□□ 0.25
HCN1O60741 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.64■□□□□ 0.25
HCN1O60741 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.64■□□□□ 0.25
HCN1O60741 KRT126P-201ENST00000549467 1181 ntBASIC16.64■□□□□ 0.25
HCN1O60741 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.64■□□□□ 0.25
HCN1O60741 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.64■□□□□ 0.25
HCN1O60741 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HCN1O60741 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HCN1O60741 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCN1O60741 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCN1O60741 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.64■□□□□ 0.25
HCN1O60741 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.64■□□□□ 0.25
HCN1O60741 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCN1O60741 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCN1O60741 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCN1O60741 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.64■□□□□ 0.25
HCN1O60741 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCN1O60741 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCN1O60741 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCN1O60741 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
HCN1O60741 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCN1O60741 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCN1O60741 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
HCN1O60741 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HCN1O60741 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.63■□□□□ 0.25
HCN1O60741 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HCN1O60741 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCN1O60741 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HCN1O60741 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCN1O60741 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
HCN1O60741 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.63■□□□□ 0.25
HCN1O60741 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCN1O60741 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.63■□□□□ 0.25
HCN1O60741 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HCN1O60741 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCN1O60741 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HCN1O60741 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HCN1O60741 CHCHD2P8-201ENST00000429873 447 ntBASIC16.63■□□□□ 0.25
HCN1O60741 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCN1O60741 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HCN1O60741 AP003733.1-201ENST00000491725 852 ntBASIC16.63■□□□□ 0.25
HCN1O60741 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.63■□□□□ 0.25
HCN1O60741 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms