Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16■□□□□ 0.15
ZIC3O60481 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16■□□□□ 0.15
ZIC3O60481 AC106795.1-205ENST00000512851 1056 ntBASIC16■□□□□ 0.15
ZIC3O60481 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16■□□□□ 0.15
ZIC3O60481 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16■□□□□ 0.15
ZIC3O60481 AP001269.4-201ENST00000609611 512 ntBASIC16■□□□□ 0.15
ZIC3O60481 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16■□□□□ 0.15
ZIC3O60481 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16■□□□□ 0.15
ZIC3O60481 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
ZIC3O60481 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZIC3O60481 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16■□□□□ 0.15
ZIC3O60481 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
ZIC3O60481 AP005117.1-201ENST00000584346 1413 ntBASIC16■□□□□ 0.15
ZIC3O60481 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16■□□□□ 0.15
ZIC3O60481 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16■□□□□ 0.15
ZIC3O60481 SIRPAP1-201ENST00000448467 1770 ntBASIC16■□□□□ 0.15
ZIC3O60481 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZIC3O60481 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZIC3O60481 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.99■□□□□ 0.15
ZIC3O60481 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.99■□□□□ 0.15
ZIC3O60481 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
ZIC3O60481 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.99■□□□□ 0.15
ZIC3O60481 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZIC3O60481 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZIC3O60481 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZIC3O60481 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
ZIC3O60481 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZIC3O60481 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZIC3O60481 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.99■□□□□ 0.15
ZIC3O60481 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
ZIC3O60481 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZIC3O60481 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.99■□□□□ 0.15
ZIC3O60481 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.99■□□□□ 0.15
ZIC3O60481 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
ZIC3O60481 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.99■□□□□ 0.15
ZIC3O60481 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZIC3O60481 AD001527.2-201ENST00000622994 785 ntBASIC15.99■□□□□ 0.15
ZIC3O60481 AP000867.4-201ENST00000641616 219 ntBASIC15.99■□□□□ 0.15
ZIC3O60481 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.99■□□□□ 0.15
ZIC3O60481 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZIC3O60481 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
ZIC3O60481 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZIC3O60481 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZIC3O60481 AC007613.1-201ENST00000572811 2597 ntBASIC15.99■□□□□ 0.15
ZIC3O60481 AC008764.6-201ENST00000595909 2069 ntBASIC15.99■□□□□ 0.15
ZIC3O60481 AC006116.8-202ENST00000587620 1550 ntBASIC15.99■□□□□ 0.15
ZIC3O60481 AL049757.1-201ENST00000616842 1596 ntBASIC15.99■□□□□ 0.15
ZIC3O60481 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZIC3O60481 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
ZIC3O60481 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
ZIC3O60481 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.99■□□□□ 0.15
ZIC3O60481 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZIC3O60481 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZIC3O60481 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
ZIC3O60481 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.99■□□□□ 0.15
ZIC3O60481 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ZIC3O60481 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.98■□□□□ 0.15
ZIC3O60481 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZIC3O60481 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZIC3O60481 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.98■□□□□ 0.15
ZIC3O60481 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ZIC3O60481 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZIC3O60481 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
ZIC3O60481 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
ZIC3O60481 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZIC3O60481 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.98■□□□□ 0.15
ZIC3O60481 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
ZIC3O60481 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ZIC3O60481 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZIC3O60481 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ZIC3O60481 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZIC3O60481 AC079781.3-201ENST00000449110 356 ntBASIC15.98■□□□□ 0.15
ZIC3O60481 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.98■□□□□ 0.15
ZIC3O60481 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ZIC3O60481 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.98■□□□□ 0.15
ZIC3O60481 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.98■□□□□ 0.15
ZIC3O60481 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.98■□□□□ 0.15
ZIC3O60481 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.98■□□□□ 0.15
ZIC3O60481 AC104692.2-201ENST00000603054 253 ntBASIC15.98■□□□□ 0.15
ZIC3O60481 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
ZIC3O60481 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZIC3O60481 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
ZIC3O60481 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ZIC3O60481 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZIC3O60481 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZIC3O60481 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
ZIC3O60481 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ZIC3O60481 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZIC3O60481 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
ZIC3O60481 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ZIC3O60481 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.97■□□□□ 0.15
ZIC3O60481 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZIC3O60481 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZIC3O60481 AC012317.2-201ENST00000623305 2251 ntBASIC15.97■□□□□ 0.15
ZIC3O60481 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZIC3O60481 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZIC3O60481 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.97■□□□□ 0.15
ZIC3O60481 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
ZIC3O60481 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZIC3O60481 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms