Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GDF9O60383 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
GDF9O60383 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GDF9O60383 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GDF9O60383 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.22■□□□□ 0.35
GDF9O60383 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDF9O60383 RNF165-205ENST00000588679 2904 ntBASIC17.22■□□□□ 0.35
GDF9O60383 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDF9O60383 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDF9O60383 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
GDF9O60383 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDF9O60383 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDF9O60383 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDF9O60383 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDF9O60383 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDF9O60383 MIR661-201ENST00000384842 89 ntBASIC17.22■□□□□ 0.35
GDF9O60383 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
GDF9O60383 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.22■□□□□ 0.35
GDF9O60383 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.22■□□□□ 0.35
GDF9O60383 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.22■□□□□ 0.35
GDF9O60383 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.22■□□□□ 0.35
GDF9O60383 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
GDF9O60383 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.22■□□□□ 0.35
GDF9O60383 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDF9O60383 OR7E47P-204ENST00000575924 449 ntBASIC17.22■□□□□ 0.35
GDF9O60383 RN7SL204P-201ENST00000582831 262 ntBASIC17.22■□□□□ 0.35
GDF9O60383 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GDF9O60383 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GDF9O60383 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.22■□□□□ 0.35
GDF9O60383 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.22■□□□□ 0.35
GDF9O60383 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GDF9O60383 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDF9O60383 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GDF9O60383 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDF9O60383 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.21■□□□□ 0.35
GDF9O60383 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
GDF9O60383 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GDF9O60383 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
GDF9O60383 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.21■□□□□ 0.35
GDF9O60383 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDF9O60383 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
GDF9O60383 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GDF9O60383 AC096633.1-201ENST00000422446 749 ntBASIC17.21■□□□□ 0.35
GDF9O60383 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.21■□□□□ 0.35
GDF9O60383 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.21■□□□□ 0.35
GDF9O60383 GAPDHP21-201ENST00000450301 1010 ntBASIC17.21■□□□□ 0.35
GDF9O60383 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.21■□□□□ 0.35
GDF9O60383 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.21■□□□□ 0.35
GDF9O60383 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.21■□□□□ 0.35
GDF9O60383 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GDF9O60383 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.21■□□□□ 0.35
GDF9O60383 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
GDF9O60383 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
GDF9O60383 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDF9O60383 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDF9O60383 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDF9O60383 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GDF9O60383 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.21■□□□□ 0.35
GDF9O60383 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GDF9O60383 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
GDF9O60383 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
GDF9O60383 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.21■□□□□ 0.34
GDF9O60383 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF9O60383 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF9O60383 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF9O60383 SIRPAP1-201ENST00000448467 1770 ntBASIC17.2■□□□□ 0.34
GDF9O60383 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDF9O60383 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDF9O60383 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
GDF9O60383 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GDF9O60383 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.2■□□□□ 0.34
GDF9O60383 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF9O60383 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF9O60383 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDF9O60383 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.2■□□□□ 0.34
GDF9O60383 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.2■□□□□ 0.34
GDF9O60383 AC023141.13-201ENST00000604991 943 ntBASIC17.2■□□□□ 0.34
GDF9O60383 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GDF9O60383 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF9O60383 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDF9O60383 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDF9O60383 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.2■□□□□ 0.34
GDF9O60383 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF9O60383 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF9O60383 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
GDF9O60383 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
GDF9O60383 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDF9O60383 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
GDF9O60383 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.2■□□□□ 0.34
GDF9O60383 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF9O60383 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF9O60383 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDF9O60383 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.2■□□□□ 0.34
GDF9O60383 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.2■□□□□ 0.34
GDF9O60383 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDF9O60383 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.19■□□□□ 0.34
GDF9O60383 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDF9O60383 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.19■□□□□ 0.34
GDF9O60383 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GDF9O60383 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms