Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VEGFDO43915 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VEGFDO43915 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VEGFDO43915 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VEGFDO43915 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
VEGFDO43915 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VEGFDO43915 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VEGFDO43915 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VEGFDO43915 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VEGFDO43915 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VEGFDO43915 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VEGFDO43915 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VEGFDO43915 NOC2LP1-202ENST00000452600 2235 ntBASIC17.44■□□□□ 0.38
VEGFDO43915 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
VEGFDO43915 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.44■□□□□ 0.38
VEGFDO43915 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.44■□□□□ 0.38
VEGFDO43915 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VEGFDO43915 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.44■□□□□ 0.38
VEGFDO43915 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.44■□□□□ 0.38
VEGFDO43915 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.44■□□□□ 0.38
VEGFDO43915 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.44■□□□□ 0.38
VEGFDO43915 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.44■□□□□ 0.38
VEGFDO43915 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VEGFDO43915 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VEGFDO43915 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VEGFDO43915 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VEGFDO43915 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VEGFDO43915 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
VEGFDO43915 ABCD1P5-201ENST00000445663 754 ntBASIC17.44■□□□□ 0.38
VEGFDO43915 FAAHP1-202ENST00000446499 1238 ntBASIC17.44■□□□□ 0.38
VEGFDO43915 SAPCD2P3-201ENST00000455031 850 ntBASIC17.44■□□□□ 0.38
VEGFDO43915 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VEGFDO43915 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.44■□□□□ 0.38
VEGFDO43915 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.44■□□□□ 0.38
VEGFDO43915 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.44■□□□□ 0.38
VEGFDO43915 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
VEGFDO43915 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VEGFDO43915 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VEGFDO43915 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.44■□□□□ 0.38
VEGFDO43915 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.44■□□□□ 0.38
VEGFDO43915 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VEGFDO43915 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VEGFDO43915 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VEGFDO43915 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VEGFDO43915 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
VEGFDO43915 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.43■□□□□ 0.38
VEGFDO43915 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VEGFDO43915 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VEGFDO43915 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.43■□□□□ 0.38
VEGFDO43915 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VEGFDO43915 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VEGFDO43915 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VEGFDO43915 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VEGFDO43915 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
VEGFDO43915 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.43■□□□□ 0.38
VEGFDO43915 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.43■□□□□ 0.38
VEGFDO43915 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VEGFDO43915 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VEGFDO43915 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VEGFDO43915 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.43■□□□□ 0.38
VEGFDO43915 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VEGFDO43915 RBM17P3-201ENST00000417687 1192 ntBASIC17.43■□□□□ 0.38
VEGFDO43915 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.43■□□□□ 0.38
VEGFDO43915 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.43■□□□□ 0.38
VEGFDO43915 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.43■□□□□ 0.38
VEGFDO43915 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.43■□□□□ 0.38
VEGFDO43915 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.43■□□□□ 0.38
VEGFDO43915 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.43■□□□□ 0.38
VEGFDO43915 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VEGFDO43915 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VEGFDO43915 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.43■□□□□ 0.38
VEGFDO43915 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.43■□□□□ 0.38
VEGFDO43915 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VEGFDO43915 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
VEGFDO43915 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
VEGFDO43915 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.43■□□□□ 0.38
VEGFDO43915 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VEGFDO43915 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VEGFDO43915 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VEGFDO43915 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VEGFDO43915 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VEGFDO43915 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VEGFDO43915 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.42■□□□□ 0.38
VEGFDO43915 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VEGFDO43915 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VEGFDO43915 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VEGFDO43915 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.42■□□□□ 0.38
VEGFDO43915 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
VEGFDO43915 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.42■□□□□ 0.38
VEGFDO43915 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.42■□□□□ 0.38
VEGFDO43915 AC106795.1-205ENST00000512851 1056 ntBASIC17.42■□□□□ 0.38
VEGFDO43915 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.42■□□□□ 0.38
VEGFDO43915 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.42■□□□□ 0.38
VEGFDO43915 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VEGFDO43915 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VEGFDO43915 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VEGFDO43915 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.42■□□□□ 0.38
VEGFDO43915 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
VEGFDO43915 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
VEGFDO43915 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms