Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.21□□□□□ -0.45
NDUFA1O15239 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFA1O15239 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
NDUFA1O15239 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA1O15239 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA1O15239 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA1O15239 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA1O15239 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
NDUFA1O15239 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA1O15239 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA1O15239 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.21□□□□□ -0.46
NDUFA1O15239 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA1O15239 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
NDUFA1O15239 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA1O15239 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA1O15239 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA1O15239 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFA1O15239 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC12.21□□□□□ -0.46
NDUFA1O15239 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA1O15239 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.2□□□□□ -0.46
NDUFA1O15239 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
NDUFA1O15239 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
NDUFA1O15239 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA1O15239 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA1O15239 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA1O15239 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA1O15239 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
NDUFA1O15239 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFA1O15239 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
NDUFA1O15239 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
NDUFA1O15239 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA1O15239 AC034236.2-201ENST00000606662 1610 ntBASIC12.2□□□□□ -0.46
NDUFA1O15239 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.2□□□□□ -0.46
NDUFA1O15239 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA1O15239 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
NDUFA1O15239 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC12.2□□□□□ -0.46
NDUFA1O15239 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA1O15239 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC12.2□□□□□ -0.46
NDUFA1O15239 AC011506.1-201ENST00000474329 610 ntBASIC12.2□□□□□ -0.46
NDUFA1O15239 TK2-204ENST00000525974 1178 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFA1O15239 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFA1O15239 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFA1O15239 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
NDUFA1O15239 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFA1O15239 AP001412.1-201ENST00000608405 714 ntBASIC12.2□□□□□ -0.46
NDUFA1O15239 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA1O15239 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA1O15239 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA1O15239 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
NDUFA1O15239 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
NDUFA1O15239 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFA1O15239 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA1O15239 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA1O15239 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFA1O15239 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.19□□□□□ -0.46
NDUFA1O15239 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
NDUFA1O15239 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA1O15239 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC12.19□□□□□ -0.46
NDUFA1O15239 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA1O15239 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.19□□□□□ -0.46
NDUFA1O15239 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA1O15239 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA1O15239 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NDUFA1O15239 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA1O15239 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.19□□□□□ -0.46
NDUFA1O15239 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA1O15239 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.19□□□□□ -0.46
NDUFA1O15239 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
NDUFA1O15239 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.19□□□□□ -0.46
NDUFA1O15239 KRT18P29-201ENST00000397031 1267 ntBASIC12.19□□□□□ -0.46
NDUFA1O15239 FAM197Y1-201ENST00000421178 764 ntBASIC12.19□□□□□ -0.46
NDUFA1O15239 AC008040.2-201ENST00000461049 708 ntBASIC12.19□□□□□ -0.46
NDUFA1O15239 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA1O15239 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA1O15239 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC12.19□□□□□ -0.46
NDUFA1O15239 SLC25A1P4-201ENST00000567977 778 ntBASIC12.19□□□□□ -0.46
NDUFA1O15239 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
NDUFA1O15239 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
NDUFA1O15239 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC12.19□□□□□ -0.46
NDUFA1O15239 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA1O15239 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
NDUFA1O15239 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA1O15239 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA1O15239 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
NDUFA1O15239 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NDUFA1O15239 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA1O15239 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA1O15239 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA1O15239 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA1O15239 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA1O15239 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.19□□□□□ -0.46
NDUFA1O15239 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.19□□□□□ -0.46
NDUFA1O15239 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NDUFA1O15239 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFA1O15239 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 AC096733.2-201ENST00000609937 1394 ntBASIC12.18□□□□□ -0.46
NDUFA1O15239 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFA1O15239 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NDUFA1O15239 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms