Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 DDX43P3-201ENST00000441064 443 ntBASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.95■□□□□ 0.14
COL6A6A6NMZ7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 ATP5G2P4-201ENST00000442175 420 ntBASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 AL512356.2-201ENST00000546955 174 ntBASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 NME2P1-201ENST00000426182 414 ntBASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 AC009102.3-201ENST00000623118 1491 ntBASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL6A6A6NMZ7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 AC074386.1-202ENST00000463561 864 ntBASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 AL049812.1-201ENST00000432563 2267 ntBASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 COX5BP8-201ENST00000416911 349 ntBASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 ARSEP1-201ENST00000420443 635 ntBASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.93■□□□□ 0.14
COL6A6A6NMZ7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms