Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
LAMB4A4D0S4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
LAMB4A4D0S4 CD63-210ENST00000550776 870 ntTSL 5 BASIC22.3■■□□□ 1.16
LAMB4A4D0S4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LAMB4A4D0S4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LAMB4A4D0S4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LAMB4A4D0S4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
LAMB4A4D0S4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LAMB4A4D0S4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LAMB4A4D0S4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LAMB4A4D0S4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LAMB4A4D0S4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LAMB4A4D0S4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC22.29■■□□□ 1.16
LAMB4A4D0S4 AP006288.1-201ENST00000446065 395 ntBASIC22.29■■□□□ 1.16
LAMB4A4D0S4 AC004967.1-201ENST00000453589 447 ntBASIC22.29■■□□□ 1.16
LAMB4A4D0S4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC22.29■■□□□ 1.16
LAMB4A4D0S4 AL513190.1-201ENST00000621254 727 ntBASIC22.29■■□□□ 1.16
LAMB4A4D0S4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.29■■□□□ 1.16
LAMB4A4D0S4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC22.29■■□□□ 1.16
LAMB4A4D0S4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
LAMB4A4D0S4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
LAMB4A4D0S4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LAMB4A4D0S4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
LAMB4A4D0S4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LAMB4A4D0S4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC22.28■■□□□ 1.16
LAMB4A4D0S4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LAMB4A4D0S4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LAMB4A4D0S4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC22.28■■□□□ 1.16
LAMB4A4D0S4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
LAMB4A4D0S4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
LAMB4A4D0S4 MCCD1P2-201ENST00000423228 335 ntBASIC22.28■■□□□ 1.16
LAMB4A4D0S4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC22.28■■□□□ 1.16
LAMB4A4D0S4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC22.28■■□□□ 1.16
LAMB4A4D0S4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC22.28■■□□□ 1.16
LAMB4A4D0S4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.28■■□□□ 1.16
LAMB4A4D0S4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LAMB4A4D0S4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
LAMB4A4D0S4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC22.28■■□□□ 1.16
LAMB4A4D0S4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.28■■□□□ 1.16
LAMB4A4D0S4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC22.28■■□□□ 1.16
LAMB4A4D0S4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC22.28■■□□□ 1.16
LAMB4A4D0S4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.27■■□□□ 1.16
LAMB4A4D0S4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 DNAJB3-202ENST00000449667 1266 ntBASIC22.27■■□□□ 1.16
LAMB4A4D0S4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 TK1-204ENST00000590430 683 ntTSL 3 BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 AC097637.2-201ENST00000624096 1997 ntBASIC22.27■■□□□ 1.16
LAMB4A4D0S4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 PDPK2P-202ENST00000562415 1191 ntBASIC22.27■■□□□ 1.16
LAMB4A4D0S4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 AL691403.2-201ENST00000618460 490 ntBASIC22.27■■□□□ 1.16
LAMB4A4D0S4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC22.27■■□□□ 1.16
LAMB4A4D0S4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
LAMB4A4D0S4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 BICD1-207ENST00000551848 1962 ntBASIC22.26■■□□□ 1.15
LAMB4A4D0S4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 COA5-202ENST00000409997 557 ntTSL 4 BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LAMB4A4D0S4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LAMB4A4D0S4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
LAMB4A4D0S4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC22.25■■□□□ 1.15
LAMB4A4D0S4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
LAMB4A4D0S4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LAMB4A4D0S4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
LAMB4A4D0S4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC22.25■■□□□ 1.15
LAMB4A4D0S4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC22.25■■□□□ 1.15
LAMB4A4D0S4 LINC00982-205ENST00000420957 435 ntBASIC22.25■■□□□ 1.15
LAMB4A4D0S4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC22.25■■□□□ 1.15
LAMB4A4D0S4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC22.25■■□□□ 1.15
LAMB4A4D0S4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC22.25■■□□□ 1.15
LAMB4A4D0S4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms