Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 UNC93B7-201ENST00000509439 705 ntBASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 FOSL1P1-201ENST00000511041 816 ntBASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 AL732292.2-201ENST00000609649 430 ntBASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 AC004263.2-201ENST00000617183 678 ntBASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 AC233702.3-201ENST00000578656 1387 ntBASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
PTPDC1A2A3K4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 FZD10-202ENST00000539839 3282 ntBASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.93■□□□□ 0.94
PTPDC1A2A3K4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 AL845331.1-201ENST00000424978 1190 ntBASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 Z69720.1-201ENST00000601483 472 ntBASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 AC022898.2-201ENST00000616822 1312 ntBASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPDC1A2A3K4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms