Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV18A0A075B6X5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
TRAV18A0A075B6X5 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV18A0A075B6X5 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV18A0A075B6X5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV18A0A075B6X5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TRAV18A0A075B6X5 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
TRAV18A0A075B6X5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 AC009065.1-201ENST00000564055 1225 ntBASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 RN7SL471P-201ENST00000580476 299 ntBASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 AC104771.1-201ENST00000603335 964 ntBASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 AC073195.1-201ENST00000607241 877 ntBASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV18A0A075B6X5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 SLC25A1P4-201ENST00000567977 778 ntBASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 PCDHB19P-201ENST00000570871 2371 ntBASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
TRAV18A0A075B6X5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV18A0A075B6X5 MESTP1-201ENST00000404287 994 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms