Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC01558Q9Y6Z2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
LINC01558Q9Y6Z2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
LINC01558Q9Y6Z2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01558Q9Y6Z2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01558Q9Y6Z2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LINC01558Q9Y6Z2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01558Q9Y6Z2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01558Q9Y6Z2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LINC01558Q9Y6Z2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
LINC01558Q9Y6Z2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01558Q9Y6Z2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01558Q9Y6Z2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LINC01558Q9Y6Z2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01558Q9Y6Z2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01558Q9Y6Z2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LINC01558Q9Y6Z2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01558Q9Y6Z2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01558Q9Y6Z2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01558Q9Y6Z2 ABCB10P4-201ENST00000566803 2184 ntBASIC12.88□□□□□ -0.35
LINC01558Q9Y6Z2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01558Q9Y6Z2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01558Q9Y6Z2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01558Q9Y6Z2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01558Q9Y6Z2 AL139125.2-201ENST00000623134 1869 ntBASIC12.87□□□□□ -0.35
LINC01558Q9Y6Z2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01558Q9Y6Z2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01558Q9Y6Z2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01558Q9Y6Z2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01558Q9Y6Z2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LINC01558Q9Y6Z2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01558Q9Y6Z2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01558Q9Y6Z2 PKD1P6-201ENST00000343738 4769 ntBASIC12.87□□□□□ -0.35
LINC01558Q9Y6Z2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01558Q9Y6Z2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01558Q9Y6Z2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LINC01558Q9Y6Z2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01558Q9Y6Z2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01558Q9Y6Z2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC01558Q9Y6Z2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01558Q9Y6Z2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01558Q9Y6Z2 C9orf163-202ENST00000624034 2573 ntBASIC12.85□□□□□ -0.35
LINC01558Q9Y6Z2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC01558Q9Y6Z2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC12.85□□□□□ -0.35
LINC01558Q9Y6Z2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC01558Q9Y6Z2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01558Q9Y6Z2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LINC01558Q9Y6Z2 AC142381.3-201ENST00000568208 1670 ntBASIC12.84□□□□□ -0.35
LINC01558Q9Y6Z2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01558Q9Y6Z2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01558Q9Y6Z2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01558Q9Y6Z2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01558Q9Y6Z2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01558Q9Y6Z2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01558Q9Y6Z2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC01558Q9Y6Z2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
LINC01558Q9Y6Z2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
LINC01558Q9Y6Z2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LINC01558Q9Y6Z2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01558Q9Y6Z2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01558Q9Y6Z2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01558Q9Y6Z2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC01558Q9Y6Z2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LINC01558Q9Y6Z2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC01558Q9Y6Z2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC01558Q9Y6Z2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC01558Q9Y6Z2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01558Q9Y6Z2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01558Q9Y6Z2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC01558Q9Y6Z2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
LINC01558Q9Y6Z2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
LINC01558Q9Y6Z2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC01558Q9Y6Z2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01558Q9Y6Z2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01558Q9Y6Z2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC01558Q9Y6Z2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01558Q9Y6Z2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01558Q9Y6Z2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01558Q9Y6Z2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01558Q9Y6Z2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC12.81□□□□□ -0.36
LINC01558Q9Y6Z2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LINC01558Q9Y6Z2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01558Q9Y6Z2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01558Q9Y6Z2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01558Q9Y6Z2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC01558Q9Y6Z2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01558Q9Y6Z2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01558Q9Y6Z2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LINC01558Q9Y6Z2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01558Q9Y6Z2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01558Q9Y6Z2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01558Q9Y6Z2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01558Q9Y6Z2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01558Q9Y6Z2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
LINC01558Q9Y6Z2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01558Q9Y6Z2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LINC01558Q9Y6Z2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01558Q9Y6Z2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LINC01558Q9Y6Z2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01558Q9Y6Z2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms