Protein–RNA interactions for Protein: Q9BUK0

CHCHD7, Coiled-coil-helix-coiled-coil-helix domain-containing protein 7, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD7Q9BUK0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHCHD7Q9BUK0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.2■□□□□ 0.34
CHCHD7Q9BUK0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CHCHD7Q9BUK0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHCHD7Q9BUK0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHCHD7Q9BUK0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHCHD7Q9BUK0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHCHD7Q9BUK0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHCHD7Q9BUK0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHCHD7Q9BUK0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHCHD7Q9BUK0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.18■□□□□ 0.34
CHCHD7Q9BUK0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.18■□□□□ 0.34
CHCHD7Q9BUK0 DUX4L13-201ENST00000554103 1267 ntBASIC17.18■□□□□ 0.34
CHCHD7Q9BUK0 DUX4L15-201ENST00000611059 1267 ntBASIC17.18■□□□□ 0.34
CHCHD7Q9BUK0 DUX4L23-201ENST00000615195 1269 ntBASIC17.18■□□□□ 0.34
CHCHD7Q9BUK0 DUX4L24-201ENST00000617576 1269 ntBASIC17.18■□□□□ 0.34
CHCHD7Q9BUK0 DUX4L22-201ENST00000618238 1269 ntBASIC17.18■□□□□ 0.34
CHCHD7Q9BUK0 DUX4L20-201ENST00000619712 1269 ntBASIC17.18■□□□□ 0.34
CHCHD7Q9BUK0 DUX4L21-201ENST00000622058 1269 ntBASIC17.18■□□□□ 0.34
CHCHD7Q9BUK0 DUX4L10-201ENST00000622460 1267 ntBASIC17.18■□□□□ 0.34
CHCHD7Q9BUK0 DUX4L25-201ENST00000624915 1269 ntBASIC17.18■□□□□ 0.34
CHCHD7Q9BUK0 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.18■□□□□ 0.34
CHCHD7Q9BUK0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHCHD7Q9BUK0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.18■□□□□ 0.34
CHCHD7Q9BUK0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CHCHD7Q9BUK0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHCHD7Q9BUK0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.17■□□□□ 0.34
CHCHD7Q9BUK0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHCHD7Q9BUK0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHCHD7Q9BUK0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHCHD7Q9BUK0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.16■□□□□ 0.34
CHCHD7Q9BUK0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHCHD7Q9BUK0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHCHD7Q9BUK0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CHCHD7Q9BUK0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
CHCHD7Q9BUK0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHCHD7Q9BUK0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.16■□□□□ 0.34
CHCHD7Q9BUK0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHCHD7Q9BUK0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.16■□□□□ 0.34
CHCHD7Q9BUK0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHCHD7Q9BUK0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD7Q9BUK0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.15■□□□□ 0.34
CHCHD7Q9BUK0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD7Q9BUK0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CHCHD7Q9BUK0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD7Q9BUK0 ZNRF2P2-203ENST00000454624 420 ntBASIC17.15■□□□□ 0.34
CHCHD7Q9BUK0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.15■□□□□ 0.34
CHCHD7Q9BUK0 AC008813.1-201ENST00000536597 885 ntBASIC17.15■□□□□ 0.34
CHCHD7Q9BUK0 DUX4L11-201ENST00000611504 1267 ntBASIC17.15■□□□□ 0.34
CHCHD7Q9BUK0 DUX4L12-201ENST00000614593 1267 ntBASIC17.15■□□□□ 0.34
CHCHD7Q9BUK0 DUX4L14-201ENST00000621227 1267 ntBASIC17.15■□□□□ 0.34
CHCHD7Q9BUK0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD7Q9BUK0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD7Q9BUK0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD7Q9BUK0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.15■□□□□ 0.34
CHCHD7Q9BUK0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.15■□□□□ 0.34
CHCHD7Q9BUK0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD7Q9BUK0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHCHD7Q9BUK0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.14■□□□□ 0.33
CHCHD7Q9BUK0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHCHD7Q9BUK0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.14■□□□□ 0.33
CHCHD7Q9BUK0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CHCHD7Q9BUK0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CHCHD7Q9BUK0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD7Q9BUK0 AC093323.1-202ENST00000635031 2045 ntBASIC17.13■□□□□ 0.33
CHCHD7Q9BUK0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD7Q9BUK0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD7Q9BUK0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.13■□□□□ 0.33
CHCHD7Q9BUK0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD7Q9BUK0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD7Q9BUK0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CHCHD7Q9BUK0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD7Q9BUK0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD7Q9BUK0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD7Q9BUK0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD7Q9BUK0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD7Q9BUK0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD7Q9BUK0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD7Q9BUK0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD7Q9BUK0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.11■□□□□ 0.33
CHCHD7Q9BUK0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD7Q9BUK0 ABHD17AP4-201ENST00000411545 909 ntBASIC17.11■□□□□ 0.33
CHCHD7Q9BUK0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD7Q9BUK0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD7Q9BUK0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHCHD7Q9BUK0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHCHD7Q9BUK0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHCHD7Q9BUK0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CHCHD7Q9BUK0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHCHD7Q9BUK0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.1■□□□□ 0.33
CHCHD7Q9BUK0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHCHD7Q9BUK0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHCHD7Q9BUK0 AC010501.1-201ENST00000606270 1962 ntBASIC17.1■□□□□ 0.33
CHCHD7Q9BUK0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHCHD7Q9BUK0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHCHD7Q9BUK0 ERN1-208ENST00000606895 2068 ntBASIC17.09■□□□□ 0.33
CHCHD7Q9BUK0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHCHD7Q9BUK0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHCHD7Q9BUK0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHCHD7Q9BUK0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms