Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LINC00479Q96M42 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.64■□□□□ 0.58
LINC00479Q96M42 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LINC00479Q96M42 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LINC00479Q96M42 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.64■□□□□ 0.57
LINC00479Q96M42 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00479Q96M42 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00479Q96M42 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LINC00479Q96M42 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00479Q96M42 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00479Q96M42 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LINC00479Q96M42 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LINC00479Q96M42 MIR6090-201ENST00000622481 60 ntBASIC18.63■□□□□ 0.57
LINC00479Q96M42 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00479Q96M42 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00479Q96M42 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.62■□□□□ 0.57
LINC00479Q96M42 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC00479Q96M42 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LINC00479Q96M42 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.62■□□□□ 0.57
LINC00479Q96M42 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.62■□□□□ 0.57
LINC00479Q96M42 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
LINC00479Q96M42 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LINC00479Q96M42 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC00479Q96M42 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.61■□□□□ 0.57
LINC00479Q96M42 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LINC00479Q96M42 AC108673.1-201ENST00000510422 1159 ntBASIC18.61■□□□□ 0.57
LINC00479Q96M42 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC00479Q96M42 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC00479Q96M42 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC00479Q96M42 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00479Q96M42 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00479Q96M42 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
LINC00479Q96M42 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00479Q96M42 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.6■□□□□ 0.57
LINC00479Q96M42 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00479Q96M42 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00479Q96M42 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.6■□□□□ 0.57
LINC00479Q96M42 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
LINC00479Q96M42 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00479Q96M42 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00479Q96M42 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LINC00479Q96M42 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LINC00479Q96M42 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00479Q96M42 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00479Q96M42 AC142381.3-201ENST00000568208 1670 ntBASIC18.59■□□□□ 0.57
LINC00479Q96M42 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00479Q96M42 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00479Q96M42 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00479Q96M42 AC010501.1-201ENST00000606270 1962 ntBASIC18.59■□□□□ 0.57
LINC00479Q96M42 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LINC00479Q96M42 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.58■□□□□ 0.56
LINC00479Q96M42 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.58■□□□□ 0.56
LINC00479Q96M42 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00479Q96M42 WHAMMP3-201ENST00000611636 1609 ntBASIC18.57■□□□□ 0.56
LINC00479Q96M42 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00479Q96M42 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00479Q96M42 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.57■□□□□ 0.56
LINC00479Q96M42 AC005559.1-201ENST00000589661 871 ntBASIC18.57■□□□□ 0.56
LINC00479Q96M42 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00479Q96M42 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00479Q96M42 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00479Q96M42 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LINC00479Q96M42 AC022211.4-201ENST00000625094 2161 ntBASIC18.56■□□□□ 0.56
LINC00479Q96M42 AC138932.3-201ENST00000567634 1902 ntBASIC18.56■□□□□ 0.56
LINC00479Q96M42 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LINC00479Q96M42 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00479Q96M42 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00479Q96M42 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
LINC00479Q96M42 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00479Q96M42 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.55■□□□□ 0.56
LINC00479Q96M42 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00479Q96M42 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LINC00479Q96M42 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00479Q96M42 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
LINC00479Q96M42 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00479Q96M42 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LINC00479Q96M42 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00479Q96M42 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.54■□□□□ 0.56
LINC00479Q96M42 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00479Q96M42 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00479Q96M42 AL139125.2-201ENST00000623134 1869 ntBASIC18.54■□□□□ 0.56
LINC00479Q96M42 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC00479Q96M42 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00479Q96M42 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.53■□□□□ 0.56
LINC00479Q96M42 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00479Q96M42 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
LINC00479Q96M42 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00479Q96M42 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00479Q96M42 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.52■□□□□ 0.56
LINC00479Q96M42 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00479Q96M42 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00479Q96M42 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.52■□□□□ 0.56
LINC00479Q96M42 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.52■□□□□ 0.56
LINC00479Q96M42 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00479Q96M42 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LINC00479Q96M42 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.52■□□□□ 0.55
LINC00479Q96M42 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINC00479Q96M42 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
LINC00479Q96M42 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00479Q96M42 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms