Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.4■■□□□ 1.5
PHC3Q8NDX5 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
PHC3Q8NDX5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
PHC3Q8NDX5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
PHC3Q8NDX5 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PHC3Q8NDX5 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PHC3Q8NDX5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PHC3Q8NDX5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PHC3Q8NDX5 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.38■■□□□ 1.49
PHC3Q8NDX5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
PHC3Q8NDX5 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PHC3Q8NDX5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.38■■□□□ 1.49
PHC3Q8NDX5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PHC3Q8NDX5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PHC3Q8NDX5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.38■■□□□ 1.49
PHC3Q8NDX5 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PHC3Q8NDX5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PHC3Q8NDX5 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.37■■□□□ 1.49
PHC3Q8NDX5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
PHC3Q8NDX5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PHC3Q8NDX5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PHC3Q8NDX5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
PHC3Q8NDX5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PHC3Q8NDX5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.36■■□□□ 1.49
PHC3Q8NDX5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
PHC3Q8NDX5 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PHC3Q8NDX5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
PHC3Q8NDX5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PHC3Q8NDX5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.36■■□□□ 1.49
PHC3Q8NDX5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
PHC3Q8NDX5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PHC3Q8NDX5 BX255925.1-201ENST00000566954 1854 ntBASIC24.35■■□□□ 1.49
PHC3Q8NDX5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PHC3Q8NDX5 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PHC3Q8NDX5 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.35■■□□□ 1.49
PHC3Q8NDX5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
PHC3Q8NDX5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.34■■□□□ 1.49
PHC3Q8NDX5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.34■■□□□ 1.49
PHC3Q8NDX5 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.34■■□□□ 1.49
PHC3Q8NDX5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PHC3Q8NDX5 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.34■■□□□ 1.49
PHC3Q8NDX5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PHC3Q8NDX5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PHC3Q8NDX5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
PHC3Q8NDX5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
PHC3Q8NDX5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
PHC3Q8NDX5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.33■■□□□ 1.49
PHC3Q8NDX5 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PHC3Q8NDX5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.33■■□□□ 1.49
PHC3Q8NDX5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
PHC3Q8NDX5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.33■■□□□ 1.49
PHC3Q8NDX5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
PHC3Q8NDX5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.33■■□□□ 1.48
PHC3Q8NDX5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PHC3Q8NDX5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.32■■□□□ 1.48
PHC3Q8NDX5 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PHC3Q8NDX5 AC022413.1-201ENST00000624602 984 ntBASIC24.32■■□□□ 1.48
PHC3Q8NDX5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PHC3Q8NDX5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PHC3Q8NDX5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.32■■□□□ 1.48
PHC3Q8NDX5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.31■■□□□ 1.48
PHC3Q8NDX5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PHC3Q8NDX5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
PHC3Q8NDX5 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PHC3Q8NDX5 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PHC3Q8NDX5 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PHC3Q8NDX5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
PHC3Q8NDX5 GPX1-201ENST00000419349 1106 ntBASIC24.29■■□□□ 1.48
PHC3Q8NDX5 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
PHC3Q8NDX5 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PHC3Q8NDX5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.28■■□□□ 1.48
PHC3Q8NDX5 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PHC3Q8NDX5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.28■■□□□ 1.48
PHC3Q8NDX5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PHC3Q8NDX5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PHC3Q8NDX5 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
PHC3Q8NDX5 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
PHC3Q8NDX5 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PHC3Q8NDX5 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.27■■□□□ 1.48
PHC3Q8NDX5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PHC3Q8NDX5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.27■■□□□ 1.48
PHC3Q8NDX5 AL359258.2-201ENST00000564063 1566 ntBASIC24.27■■□□□ 1.48
PHC3Q8NDX5 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
PHC3Q8NDX5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PHC3Q8NDX5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PHC3Q8NDX5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PHC3Q8NDX5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
PHC3Q8NDX5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PHC3Q8NDX5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
PHC3Q8NDX5 AC060814.1-201ENST00000554326 538 ntBASIC24.25■■□□□ 1.47
PHC3Q8NDX5 HSD17B1P1-201ENST00000590052 955 ntBASIC24.25■■□□□ 1.47
PHC3Q8NDX5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PHC3Q8NDX5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
PHC3Q8NDX5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PHC3Q8NDX5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PHC3Q8NDX5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.24■■□□□ 1.47
PHC3Q8NDX5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.24■■□□□ 1.47
PHC3Q8NDX5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PHC3Q8NDX5 AC093323.1-202ENST00000635031 2045 ntBASIC24.23■■□□□ 1.47
PHC3Q8NDX5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms