Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC007029.1-201ENST00000604183 313 ntBASIC29.96■■■□□ 2.39
RFX7Q2KHR2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
RFX7Q2KHR2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.96■■■□□ 2.39
RFX7Q2KHR2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RFX7Q2KHR2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
RFX7Q2KHR2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.95■■■□□ 2.39
RFX7Q2KHR2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
RFX7Q2KHR2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
RFX7Q2KHR2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC29.95■■■□□ 2.39
RFX7Q2KHR2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
RFX7Q2KHR2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
RFX7Q2KHR2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.38
RFX7Q2KHR2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RFX7Q2KHR2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RFX7Q2KHR2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RFX7Q2KHR2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
RFX7Q2KHR2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC29.94■■■□□ 2.38
RFX7Q2KHR2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
RFX7Q2KHR2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC29.93■■■□□ 2.38
RFX7Q2KHR2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.93■■■□□ 2.38
RFX7Q2KHR2 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.93■■■□□ 2.38
RFX7Q2KHR2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.93■■■□□ 2.38
RFX7Q2KHR2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
RFX7Q2KHR2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC29.93■■■□□ 2.38
RFX7Q2KHR2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RFX7Q2KHR2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
RFX7Q2KHR2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC29.92■■■□□ 2.38
RFX7Q2KHR2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RFX7Q2KHR2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.92■■■□□ 2.38
RFX7Q2KHR2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.91■■■□□ 2.38
RFX7Q2KHR2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RFX7Q2KHR2 AL033527.3-201ENST00000566366 1196 ntBASIC29.9■■■□□ 2.38
RFX7Q2KHR2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC29.9■■■□□ 2.38
RFX7Q2KHR2 AC142472.1-201ENST00000612013 1741 ntBASIC29.9■■■□□ 2.38
RFX7Q2KHR2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC29.89■■■□□ 2.37
RFX7Q2KHR2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.89■■■□□ 2.37
RFX7Q2KHR2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
RFX7Q2KHR2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RFX7Q2KHR2 AL359258.2-201ENST00000564063 1566 ntBASIC29.88■■■□□ 2.37
RFX7Q2KHR2 AC025884.2-201ENST00000553429 711 ntBASIC29.88■■■□□ 2.37
RFX7Q2KHR2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
RFX7Q2KHR2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
RFX7Q2KHR2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
RFX7Q2KHR2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RFX7Q2KHR2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
RFX7Q2KHR2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RFX7Q2KHR2 AC004987.1-201ENST00000428627 508 ntBASIC29.86■■■□□ 2.37
RFX7Q2KHR2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC29.86■■■□□ 2.37
RFX7Q2KHR2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RFX7Q2KHR2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
RFX7Q2KHR2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.85■■■□□ 2.37
RFX7Q2KHR2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
RFX7Q2KHR2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
RFX7Q2KHR2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RFX7Q2KHR2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
RFX7Q2KHR2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC29.85■■■□□ 2.37
RFX7Q2KHR2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RFX7Q2KHR2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
RFX7Q2KHR2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC29.84■■■□□ 2.37
RFX7Q2KHR2 AC009831.1-201ENST00000580420 1582 ntBASIC29.84■■■□□ 2.37
RFX7Q2KHR2 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.84■■■□□ 2.37
RFX7Q2KHR2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
RFX7Q2KHR2 TSPY13P-201ENST00000338964 914 ntBASIC29.83■■■□□ 2.37
RFX7Q2KHR2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.83■■■□□ 2.37
RFX7Q2KHR2 ATP5G2P3-201ENST00000429083 425 ntBASIC29.83■■■□□ 2.37
RFX7Q2KHR2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
RFX7Q2KHR2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
RFX7Q2KHR2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
RFX7Q2KHR2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
RFX7Q2KHR2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
RFX7Q2KHR2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
RFX7Q2KHR2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
RFX7Q2KHR2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
RFX7Q2KHR2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RFX7Q2KHR2 AP004609.3-201ENST00000610705 1884 ntBASIC29.81■■■□□ 2.36
RFX7Q2KHR2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC29.81■■■□□ 2.36
RFX7Q2KHR2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RFX7Q2KHR2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.8■■■□□ 2.36
RFX7Q2KHR2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
RFX7Q2KHR2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.8■■■□□ 2.36
RFX7Q2KHR2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
RFX7Q2KHR2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
RFX7Q2KHR2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.79■■■□□ 2.36
RFX7Q2KHR2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
RFX7Q2KHR2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC29.78■■■□□ 2.36
RFX7Q2KHR2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
RFX7Q2KHR2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.78■■■□□ 2.36
RFX7Q2KHR2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC29.78■■■□□ 2.36
RFX7Q2KHR2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC29.78■■■□□ 2.36
RFX7Q2KHR2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
RFX7Q2KHR2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC29.77■■■□□ 2.36
RFX7Q2KHR2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
RFX7Q2KHR2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RFX7Q2KHR2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
RFX7Q2KHR2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RFX7Q2KHR2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC29.77■■■□□ 2.36
RFX7Q2KHR2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RFX7Q2KHR2 AL592293.1-201ENST00000502889 1188 ntBASIC29.77■■■□□ 2.36
RFX7Q2KHR2 AC129492.7-201ENST00000622992 756 ntBASIC29.77■■■□□ 2.36
RFX7Q2KHR2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.76■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms