Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 GOSR2-217ENST00000638579 1273 ntTSL 513.55□□□□□ -0.242e-6■□□□□ 11.3
HNRNPUQ00839 GOSR2-223ENST00000639066 1180 ntTSL 512.8□□□□□ -0.362e-6■□□□□ 11.3
HNRNPUQ00839 GOSR2-230ENST00000639985 1618 ntTSL 512.28□□□□□ -0.442e-6■□□□□ 11.3
HNRNPUQ00839 GOSR2-243ENST00000640723 941 ntTSL 511.71□□□□□ -0.532e-6■□□□□ 11.3
HNRNPUQ00839 GOSR2-229ENST00000639713 622 ntTSL 510.95□□□□□ -0.662e-6■□□□□ 11.3
HNRNPUQ00839 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.272e-6■□□□□ 11.3
HNRNPUQ00839 ZNF274-214ENST00000621145 1646 ntTSL 227.49■■□□□ 1.999e-7■□□□□ 11.3
HNRNPUQ00839 ZNF274-213ENST00000619307 1566 ntTSL 226.59■■□□□ 1.859e-7■□□□□ 11.3
HNRNPUQ00839 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.729e-7■□□□□ 11.3
HNRNPUQ00839 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC25.69■■□□□ 1.79e-7■□□□□ 11.3
HNRNPUQ00839 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.579e-7■□□□□ 11.3
HNRNPUQ00839 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.569e-7■□□□□ 11.3
HNRNPUQ00839 ZNF274-201ENST00000326804 2447 ntTSL 1 (best) BASIC17.31■□□□□ 0.369e-7■□□□□ 11.3
HNRNPUQ00839 ZNF274-211ENST00000615675 1259 ntTSL 215.98■□□□□ 0.159e-7■□□□□ 11.3
HNRNPUQ00839 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.353e-6■□□□□ 11.2
HNRNPUQ00839 RPS6KA3-202ENST00000438357 530 ntTSL 518.33■□□□□ 0.523e-6■□□□□ 11.2
HNRNPUQ00839 RPS6KA3-206ENST00000492128 553 ntTSL 49.39□□□□□ -0.913e-6■□□□□ 11.2
HNRNPUQ00839 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.784e-6■□□□□ 11.2
HNRNPUQ00839 TSPAN14-204ENST00000372157 855 ntTSL 525.5■■□□□ 1.674e-6■□□□□ 11.2
HNRNPUQ00839 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC25.5■■□□□ 1.674e-6■□□□□ 11.2
HNRNPUQ00839 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC23.74■■□□□ 1.394e-6■□□□□ 11.2
HNRNPUQ00839 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.394e-6■□□□□ 11.2
HNRNPUQ00839 TSPAN14-208ENST00000469149 959 ntTSL 222.81■■□□□ 1.244e-6■□□□□ 11.2
HNRNPUQ00839 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC20.84■□□□□ 0.934e-6■□□□□ 11.2
HNRNPUQ00839 TSPAN14-206ENST00000372164 5476 ntTSL 1 (best) BASIC13.65□□□□□ -0.224e-6■□□□□ 11.2
HNRNPUQ00839 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC11.21□□□□□ -0.614e-6■□□□□ 11.2
HNRNPUQ00839 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC9.58□□□□□ -0.884e-6■□□□□ 11.2
HNRNPUQ00839 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.984e-6■□□□□ 11.2
HNRNPUQ00839 PDE4D-217ENST00000509355 847 ntTSL 1 (best)8.57□□□□□ -1.044e-6■□□□□ 11.2
HNRNPUQ00839 PDE4D-215ENST00000506510 558 ntTSL 48.29□□□□□ -1.084e-6■□□□□ 11.2
HNRNPUQ00839 PDE4D-219ENST00000511382 581 ntTSL 45.61□□□□□ -1.514e-6■□□□□ 11.2
HNRNPUQ00839 PDE4D-213ENST00000505507 577 ntTSL 45.11□□□□□ -1.594e-6■□□□□ 11.2
HNRNPUQ00839 GRAMD1B-206ENST00000529432 6266 ntTSL 2 BASIC14.33□□□□□ -0.111e-6■□□□□ 11.2
HNRNPUQ00839 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC10.02□□□□□ -0.811e-6■□□□□ 11.2
HNRNPUQ00839 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.261e-6■□□□□ 11.2
HNRNPUQ00839 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.261e-6■□□□□ 11.2
HNRNPUQ00839 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.261e-6■□□□□ 11.2
HNRNPUQ00839 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC24.87■■□□□ 1.571e-6■□□□□ 11.1
HNRNPUQ00839 LINC00511-202ENST00000457958 1696 ntTSL 1 (best) BASIC17.16■□□□□ 0.341e-6■□□□□ 11.1
HNRNPUQ00839 LINC00511-214ENST00000581801 379 ntTSL 313.72□□□□□ -0.211e-6■□□□□ 11.1
HNRNPUQ00839 LINC00511-210ENST00000580861 467 ntTSL 411.53□□□□□ -0.561e-6■□□□□ 11.1
HNRNPUQ00839 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.135e-7■□□□□ 11.1
HNRNPUQ00839 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.365e-7■□□□□ 11.1
HNRNPUQ00839 SYNCRIP-203ENST00000444272 610 ntTSL 315.29■□□□□ 0.045e-7■□□□□ 11.1
HNRNPUQ00839 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.939e-7■□□□□ 11.1
HNRNPUQ00839 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC27.71■■■□□ 2.039e-7■□□□□ 11.1
HNRNPUQ00839 MEPCE-204ENST00000497759 666 ntTSL 326.58■■□□□ 1.859e-7■□□□□ 11.1
HNRNPUQ00839 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC25.85■■□□□ 1.739e-7■□□□□ 11.1
HNRNPUQ00839 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.539e-7■□□□□ 11.1
HNRNPUQ00839 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.59e-7■□□□□ 11.1
HNRNPUQ00839 PRMT1-216ENST00000530361 866 ntTSL 323.42■■□□□ 1.349e-7■□□□□ 11.1
HNRNPUQ00839 HNRNPL-212ENST00000601449 1918 ntTSL 523.32■■□□□ 1.329e-7■□□□□ 11.1
HNRNPUQ00839 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC23.04■■□□□ 1.289e-7■□□□□ 11.1
HNRNPUQ00839 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC21.99■■□□□ 1.119e-7■□□□□ 11.1
HNRNPUQ00839 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC19.37■□□□□ 0.699e-7■□□□□ 11.1
HNRNPUQ00839 UQCC1-213ENST00000453855 1035 ntTSL 418.57■□□□□ 0.569e-7■□□□□ 11.1
HNRNPUQ00839 HNRNPL-203ENST00000595164 2404 ntTSL 218.38■□□□□ 0.539e-7■□□□□ 11.1
HNRNPUQ00839 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC18.2■□□□□ 0.59e-7■□□□□ 11.1
HNRNPUQ00839 UQCC1-215ENST00000472559 1921 ntTSL 1 (best)18.18■□□□□ 0.59e-7■□□□□ 11.1
HNRNPUQ00839 UQCC1-216ENST00000473982 551 ntTSL 418.06■□□□□ 0.489e-7■□□□□ 11.1
HNRNPUQ00839 HNRNPL-207ENST00000598985 900 ntTSL 517.96■□□□□ 0.479e-7■□□□□ 11.1
HNRNPUQ00839 MEPCE-203ENST00000479201 592 ntTSL 217.39■□□□□ 0.379e-7■□□□□ 11.1
HNRNPUQ00839 UQCC1-206ENST00000374394 2329 ntTSL 216.88■□□□□ 0.299e-7■□□□□ 11.1
HNRNPUQ00839 UQCC1-214ENST00000457259 1987 ntTSL 1 (best)16.79■□□□□ 0.289e-7■□□□□ 11.1
HNRNPUQ00839 UQCC1-203ENST00000374380 2133 ntTSL 2 BASIC16.39■□□□□ 0.219e-7■□□□□ 11.1
HNRNPUQ00839 UQCC1-201ENST00000349714 2188 ntTSL 5 BASIC16.28■□□□□ 0.29e-7■□□□□ 11.1
HNRNPUQ00839 UQCC1-210ENST00000424405 758 ntTSL 516.23■□□□□ 0.199e-7■□□□□ 11.1
HNRNPUQ00839 UQCC1-209ENST00000397556 1284 ntTSL 1 (best) BASIC15.85■□□□□ 0.139e-7■□□□□ 11.1
HNRNPUQ00839 UQCC1-202ENST00000359226 2036 ntTSL 4 BASIC15.01□□□□□ -0.019e-7■□□□□ 11.1
HNRNPUQ00839 HNRNPL-202ENST00000388749 1952 ntTSL 514.89□□□□□ -0.039e-7■□□□□ 11.1
HNRNPUQ00839 UQCC1-205ENST00000374385 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.069e-7■□□□□ 11.1
HNRNPUQ00839 HNRNPL-206ENST00000597731 3094 ntTSL 214.36□□□□□ -0.119e-7■□□□□ 11.1
HNRNPUQ00839 UQCC1-221ENST00000496812 801 ntTSL 314.27□□□□□ -0.139e-7■□□□□ 11.1
HNRNPUQ00839 HDAC7-204ENST00000417107 569 ntTSL 423.09■■□□□ 1.293e-6■□□□□ 11.1
HNRNPUQ00839 HDAC7-205ENST00000417902 576 ntTSL 323.09■■□□□ 1.293e-6■□□□□ 11.1
HNRNPUQ00839 HDAC7-213ENST00000440293 580 ntTSL 423.09■■□□□ 1.293e-6■□□□□ 11.1
HNRNPUQ00839 HDAC7-212ENST00000434070 645 ntTSL 422.15■■□□□ 1.143e-6■□□□□ 11.1
HNRNPUQ00839 HDAC7-214ENST00000445237 364 ntTSL 422.15■■□□□ 1.143e-6■□□□□ 11.1
HNRNPUQ00839 TNKS1BP1-204ENST00000528882 4336 ntTSL 521.95■■□□□ 1.13e-6■□□□□ 11.1
HNRNPUQ00839 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.043e-6■□□□□ 11.1
HNRNPUQ00839 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.043e-6■□□□□ 11.1
HNRNPUQ00839 HDAC7-210ENST00000430670 914 ntTSL 521.51■■□□□ 1.033e-6■□□□□ 11.1
HNRNPUQ00839 HDAC7-208ENST00000425451 621 ntTSL 521.33■■□□□ 1.013e-6■□□□□ 11.1
HNRNPUQ00839 HDAC7-211ENST00000433685 402 ntTSL 321.3■■□□□ 13e-6■□□□□ 11.1
HNRNPUQ00839 HDAC7-207ENST00000422254 593 ntTSL 420.38■□□□□ 0.853e-6■□□□□ 11.1
HNRNPUQ00839 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.693e-6■□□□□ 11.1
HNRNPUQ00839 HDAC7-206ENST00000421231 583 ntTSL 419.21■□□□□ 0.673e-6■□□□□ 11.1
HNRNPUQ00839 HDAC7-216ENST00000450805 579 ntTSL 418.86■□□□□ 0.613e-6■□□□□ 11.1
HNRNPUQ00839 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.493e-6■□□□□ 11.1
HNRNPUQ00839 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.493e-6■□□□□ 11.1
HNRNPUQ00839 HDAC7-230ENST00000552960 3216 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.353e-6■□□□□ 11.1
HNRNPUQ00839 HDAC7-215ENST00000447463 555 ntTSL 416.13■□□□□ 0.173e-6■□□□□ 11.1
HNRNPUQ00839 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.163e-6■□□□□ 11.1
HNRNPUQ00839 SETD5-201ENST00000302463 4786 ntTSL 1 (best) BASIC12.75□□□□□ -0.373e-6■□□□□ 11.1
HNRNPUQ00839 SETD5-208ENST00000421188 1323 ntTSL 512.03□□□□□ -0.483e-6■□□□□ 11.1
HNRNPUQ00839 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.643e-6■□□□□ 11.1
HNRNPUQ00839 SETD5-206ENST00000413704 3428 ntTSL 210.13□□□□□ -0.793e-6■□□□□ 11.1
HNRNPUQ00839 SETD5-202ENST00000399686 3362 ntTSL 510.02□□□□□ -0.813e-6■□□□□ 11.1
HNRNPUQ00839 SETD5-228ENST00000493918 4861 ntTSL 1 (best)9.81□□□□□ -0.843e-6■□□□□ 11.1
HNRNPUQ00839 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC9.69□□□□□ -0.863e-6■□□□□ 11.1
Retrieved 100 of 2,288 protein–RNA pairs in 151.2 ms