Protein–RNA interactions for Protein: P56557

TMEM50B, Transmembrane protein 50B, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50BP56557 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM50BP56557 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.77■□□□□ 0.92
TMEM50BP56557 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TMEM50BP56557 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM50BP56557 ERN1-208ENST00000606895 2068 ntBASIC20.77■□□□□ 0.92
TMEM50BP56557 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.77■□□□□ 0.92
TMEM50BP56557 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM50BP56557 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM50BP56557 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM50BP56557 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM50BP56557 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TMEM50BP56557 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM50BP56557 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM50BP56557 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM50BP56557 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM50BP56557 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TMEM50BP56557 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEM50BP56557 AL162393.1-201ENST00000437852 946 ntBASIC20.75■□□□□ 0.91
TMEM50BP56557 AC044849.2-201ENST00000606596 710 ntBASIC20.75■□□□□ 0.91
TMEM50BP56557 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
TMEM50BP56557 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM50BP56557 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEM50BP56557 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM50BP56557 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM50BP56557 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM50BP56557 AC010501.1-201ENST00000606270 1962 ntBASIC20.74■□□□□ 0.91
TMEM50BP56557 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.74■□□□□ 0.91
TMEM50BP56557 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.74■□□□□ 0.91
TMEM50BP56557 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.74■□□□□ 0.91
TMEM50BP56557 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM50BP56557 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.74■□□□□ 0.91
TMEM50BP56557 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM50BP56557 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TMEM50BP56557 AC021231.2-201ENST00000594613 730 ntBASIC20.73■□□□□ 0.91
TMEM50BP56557 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM50BP56557 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.73■□□□□ 0.91
TMEM50BP56557 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM50BP56557 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM50BP56557 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.72■□□□□ 0.91
TMEM50BP56557 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TMEM50BP56557 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM50BP56557 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.72■□□□□ 0.91
TMEM50BP56557 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM50BP56557 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM50BP56557 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM50BP56557 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
TMEM50BP56557 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM50BP56557 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM50BP56557 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM50BP56557 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM50BP56557 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM50BP56557 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM50BP56557 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM50BP56557 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
TMEM50BP56557 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.7■□□□□ 0.9
TMEM50BP56557 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM50BP56557 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TMEM50BP56557 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM50BP56557 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM50BP56557 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.69■□□□□ 0.9
TMEM50BP56557 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM50BP56557 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM50BP56557 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM50BP56557 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.68■□□□□ 0.9
TMEM50BP56557 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM50BP56557 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TMEM50BP56557 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM50BP56557 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM50BP56557 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TMEM50BP56557 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.68■□□□□ 0.9
TMEM50BP56557 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TMEM50BP56557 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.67■□□□□ 0.9
TMEM50BP56557 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM50BP56557 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TMEM50BP56557 DUX4L29-201ENST00000425409 679 ntBASIC20.65■□□□□ 0.9
TMEM50BP56557 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM50BP56557 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.64■□□□□ 0.9
TMEM50BP56557 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM50BP56557 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM50BP56557 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM50BP56557 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM50BP56557 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM50BP56557 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM50BP56557 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM50BP56557 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM50BP56557 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM50BP56557 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM50BP56557 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TMEM50BP56557 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM50BP56557 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM50BP56557 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TMEM50BP56557 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM50BP56557 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
TMEM50BP56557 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM50BP56557 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM50BP56557 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM50BP56557 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM50BP56557 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM50BP56557 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM50BP56557 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms