Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 HMG2YLR450W 3138 nt8.06□□□□□ -1.12
RPN11P43588 RPE1YJL121C 717 nt8.06□□□□□ -1.12
RPN11P43588 AAT2YLR027C 1257 nt8.06□□□□□ -1.12
RPN11P43588 COX10YPL172C 1389 nt8.06□□□□□ -1.12
RPN11P43588 CRF1YDR223W 1404 nt8.05□□□□□ -1.12
RPN11P43588 RPR2YIR015W 435 nt8.05□□□□□ -1.12
RPN11P43588 SPO7YAL009W 780 nt8.05□□□□□ -1.12
RPN11P43588 YPR127WYPR127W 1038 nt8.05□□□□□ -1.12
RPN11P43588 MET2YNL277W 1461 nt8.05□□□□□ -1.12
RPN11P43588 YEL023CYEL023C 2049 nt8.05□□□□□ -1.12
RPN11P43588 YMR034CYMR034C 1305 nt8.04□□□□□ -1.12
RPN11P43588 CBR1YIL043C 855 nt8.04□□□□□ -1.12
RPN11P43588 YPR160C-AYPR160C-A 285 nt8.04□□□□□ -1.12
RPN11P43588 MSG5YNL053W 1470 nt8.04□□□□□ -1.12
RPN11P43588 HBS1YKR084C 1836 nt8.03□□□□□ -1.12
RPN11P43588 ARE2YNR019W 1929 nt8.03□□□□□ -1.12
RPN11P43588 DFM1YDR411C 1026 nt8.03□□□□□ -1.12
RPN11P43588 BRL1YHR036W 1416 nt8.03□□□□□ -1.12
RPN11P43588 LYS1YIR034C 1122 nt8.02□□□□□ -1.13
RPN11P43588 GTO3YMR251W 1101 nt8.02□□□□□ -1.13
RPN11P43588 YJR084WYJR084W 1272 nt8.01□□□□□ -1.13
RPN11P43588 RPS5YJR123W 678 nt8.01□□□□□ -1.13
RPN11P43588 YJL045WYJL045W 1905 nt8.01□□□□□ -1.13
RPN11P43588 YBR241CYBR241C 1467 nt8□□□□□ -1.13
RPN11P43588 DAL3YIR032C 588 nt8□□□□□ -1.13
RPN11P43588 DUR3YHL016C 2208 nt8□□□□□ -1.13
RPN11P43588 FAL1YDR021W 1200 nt7.99□□□□□ -1.13
RPN11P43588 DID2YKR035W-A 615 nt7.99□□□□□ -1.13
RPN11P43588 LDB18YLL049W 540 nt7.99□□□□□ -1.13
RPN11P43588 SEC13YLR208W 894 nt7.99□□□□□ -1.13
RPN11P43588 ATP10YLR393W 840 nt7.99□□□□□ -1.13
RPN11P43588 YHR020WYHR020W 2067 nt7.98□□□□□ -1.13
RPN11P43588 MAK31YCR020C-A 267 nt7.98□□□□□ -1.13
RPN11P43588 BUG1YDL099W 1026 nt7.98□□□□□ -1.13
RPN11P43588 YDL119CYDL119C 924 nt7.98□□□□□ -1.13
RPN11P43588 MIM1YOL026C 342 nt7.98□□□□□ -1.13
RPN11P43588 snR4snR4 186 nt7.98□□□□□ -1.13
RPN11P43588 SGF73YGL066W 1974 nt7.97□□□□□ -1.13
RPN11P43588 UGX2YDL169C 672 nt7.97□□□□□ -1.13
RPN11P43588 URH1YDR400W 1023 nt7.97□□□□□ -1.13
RPN11P43588 YSC83YHR017W 1158 nt7.97□□□□□ -1.13
RPN11P43588 MSS51YLR203C 1311 nt7.97□□□□□ -1.13
RPN11P43588 AQR1YNL065W 1761 nt7.97□□□□□ -1.13
RPN11P43588 ISN1YOR155C 1353 nt7.97□□□□□ -1.13
RPN11P43588 PPM2YOL141W 2088 nt7.96□□□□□ -1.14
RPN11P43588 IRC5YFR038W 2562 nt7.96□□□□□ -1.14
RPN11P43588 YGR054WYGR054W 1929 nt7.95□□□□□ -1.14
RPN11P43588 RUF23RUF23 254 nt7.95□□□□□ -1.14
RPN11P43588 JNM1YMR294W 1122 nt7.94□□□□□ -1.14
RPN11P43588 RFC4YOL094C 972 nt7.94□□□□□ -1.14
RPN11P43588 ERI1YPL096C-A 207 nt7.94□□□□□ -1.14
RPN11P43588 MAS1YLR163C 1389 nt7.94□□□□□ -1.14
RPN11P43588 MIX17YMR002W 471 nt7.93□□□□□ -1.14
RPN11P43588 POX1YGL205W 2247 nt7.93□□□□□ -1.14
RPN11P43588 ICL1YER065C 1674 nt7.92□□□□□ -1.14
RPN11P43588 TRS31YDR472W 852 nt7.92□□□□□ -1.14
RPN11P43588 tX(XXX)DtX(XXX)D 100 nt7.92□□□□□ -1.14
RPN11P43588 PSY4YBL046W 1326 nt7.92□□□□□ -1.14
RPN11P43588 EXG2YDR261C 1689 nt7.92□□□□□ -1.14
RPN11P43588 YPL257WYPL257W 582 nt7.91□□□□□ -1.14
RPN11P43588 YDL177CYDL177C 513 nt7.9□□□□□ -1.14
RPN11P43588 SNO4YMR322C 714 nt7.9□□□□□ -1.14
RPN11P43588 YOR342CYOR342C 960 nt7.9□□□□□ -1.14
RPN11P43588 HSP33YOR391C 714 nt7.9□□□□□ -1.14
RPN11P43588 HSP32YPL280W 714 nt7.9□□□□□ -1.14
RPN11P43588 HEM14YER014W 1620 nt7.89□□□□□ -1.15
RPN11P43588 ADE12YNL220W 1302 nt7.89□□□□□ -1.15
RPN11P43588 YET3YDL072C 612 nt7.89□□□□□ -1.15
RPN11P43588 VMA16YHR026W 642 nt7.89□□□□□ -1.15
RPN11P43588 RPP1YHR062C 882 nt7.89□□□□□ -1.15
RPN11P43588 CAF40YNL288W 1122 nt7.89□□□□□ -1.15
RPN11P43588 DTR1YBR180W 1719 nt7.89□□□□□ -1.15
RPN11P43588 GNA1YFL017C 480 nt7.88□□□□□ -1.15
RPN11P43588 YJR146WYJR146W 354 nt7.88□□□□□ -1.15
RPN11P43588 RFS1YBR052C 633 nt7.87□□□□□ -1.15
RPN11P43588 DAP1YPL170W 459 nt7.87□□□□□ -1.15
RPN11P43588 MET30YIL046W 1923 nt7.87□□□□□ -1.15
RPN11P43588 PPT1YGR123C 1542 nt7.87□□□□□ -1.15
RPN11P43588 TDP1YBR223C 1635 nt7.86□□□□□ -1.15
RPN11P43588 CBP4YGR174C 513 nt7.86□□□□□ -1.15
RPN11P43588 SFP1YLR403W 2052 nt7.86□□□□□ -1.15
RPN11P43588 ADY2YCR010C 852 nt7.85□□□□□ -1.15
RPN11P43588 YFL064CYFL064C 525 nt7.85□□□□□ -1.15
RPN11P43588 ATG36YJL185C 882 nt7.85□□□□□ -1.15
RPN11P43588 SFC1YJR095W 969 nt7.85□□□□□ -1.15
RPN11P43588 AIM33YML087C 939 nt7.85□□□□□ -1.15
RPN11P43588 HSP26YBR072W 645 nt7.85□□□□□ -1.15
RPN11P43588 YPR202WYPR202W 717 nt7.85□□□□□ -1.15
RPN11P43588 FCY2YER056C 1602 nt7.85□□□□□ -1.15
RPN11P43588 YDL057WYDL057W 987 nt7.84□□□□□ -1.15
RPN11P43588 STT3YGL022W 2157 nt7.84□□□□□ -1.15
RPN11P43588 CEM1YER061C 1329 nt7.83□□□□□ -1.16
RPN11P43588 UTP4YDR324C 2331 nt7.83□□□□□ -1.16
RPN11P43588 EFM4YIL064W 774 nt7.83□□□□□ -1.16
RPN11P43588 YOR041CYOR041C 432 nt7.83□□□□□ -1.16
RPN11P43588 ECM14YHR132C 1293 nt7.82□□□□□ -1.16
RPN11P43588 ILV2YMR108W 2064 nt7.82□□□□□ -1.16
RPN11P43588 FRE5YOR384W 2085 nt7.82□□□□□ -1.16
RPN11P43588 YDL022C-AYDL022C-A 249 nt7.81□□□□□ -1.16
RPN11P43588 SYN8YAL014C 768 nt7.81□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 31.8 ms