Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.89■■□□□ 1.09
UBL3O95164 MIR219A2-201ENST00000608502 1504 ntBASIC21.89■■□□□ 1.09
UBL3O95164 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UBL3O95164 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
UBL3O95164 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
UBL3O95164 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UBL3O95164 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
UBL3O95164 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBL3O95164 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
UBL3O95164 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBL3O95164 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UBL3O95164 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.86■■□□□ 1.09
UBL3O95164 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBL3O95164 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.86■■□□□ 1.09
UBL3O95164 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBL3O95164 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.86■■□□□ 1.09
UBL3O95164 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBL3O95164 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
UBL3O95164 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
UBL3O95164 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBL3O95164 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBL3O95164 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBL3O95164 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.84■■□□□ 1.09
UBL3O95164 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UBL3O95164 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UBL3O95164 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UBL3O95164 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UBL3O95164 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
UBL3O95164 MIR4449-201ENST00000578365 66 ntBASIC21.84■■□□□ 1.09
UBL3O95164 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UBL3O95164 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UBL3O95164 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBL3O95164 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBL3O95164 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBL3O95164 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.84■■□□□ 1.09
UBL3O95164 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.84■■□□□ 1.09
UBL3O95164 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBL3O95164 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.84■■□□□ 1.09
UBL3O95164 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
UBL3O95164 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.83■■□□□ 1.09
UBL3O95164 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
UBL3O95164 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.83■■□□□ 1.08
UBL3O95164 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.83■■□□□ 1.08
UBL3O95164 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UBL3O95164 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
UBL3O95164 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBL3O95164 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UBL3O95164 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
UBL3O95164 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBL3O95164 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBL3O95164 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UBL3O95164 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.81■■□□□ 1.08
UBL3O95164 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.81■■□□□ 1.08
UBL3O95164 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.81■■□□□ 1.08
UBL3O95164 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBL3O95164 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBL3O95164 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBL3O95164 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
UBL3O95164 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBL3O95164 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBL3O95164 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.8■■□□□ 1.08
UBL3O95164 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UBL3O95164 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.8■■□□□ 1.08
UBL3O95164 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
UBL3O95164 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.79■■□□□ 1.08
UBL3O95164 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
UBL3O95164 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBL3O95164 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBL3O95164 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBL3O95164 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.79■■□□□ 1.08
UBL3O95164 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UBL3O95164 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBL3O95164 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.78■■□□□ 1.08
UBL3O95164 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBL3O95164 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBL3O95164 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBL3O95164 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBL3O95164 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UBL3O95164 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.77■■□□□ 1.08
UBL3O95164 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBL3O95164 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBL3O95164 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBL3O95164 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBL3O95164 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBL3O95164 AC126177.7-201ENST00000547904 679 ntBASIC21.77■■□□□ 1.08
UBL3O95164 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
UBL3O95164 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
UBL3O95164 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.77■■□□□ 1.08
UBL3O95164 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.77■■□□□ 1.08
UBL3O95164 AC093323.1-202ENST00000635031 2045 ntBASIC21.77■■□□□ 1.07
UBL3O95164 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
UBL3O95164 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.77■■□□□ 1.07
UBL3O95164 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
UBL3O95164 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBL3O95164 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.76■■□□□ 1.07
UBL3O95164 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
UBL3O95164 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
UBL3O95164 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBL3O95164 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.75■■□□□ 1.07
UBL3O95164 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms