Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
LINC01546A6NGU7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.49■□□□□ 0.39
LINC01546A6NGU7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01546A6NGU7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01546A6NGU7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC17.48■□□□□ 0.39
LINC01546A6NGU7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01546A6NGU7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
LINC01546A6NGU7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01546A6NGU7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01546A6NGU7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01546A6NGU7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01546A6NGU7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01546A6NGU7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01546A6NGU7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC17.47■□□□□ 0.39
LINC01546A6NGU7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC17.47■□□□□ 0.39
LINC01546A6NGU7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01546A6NGU7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC01546A6NGU7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01546A6NGU7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.46■□□□□ 0.39
LINC01546A6NGU7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.46■□□□□ 0.39
LINC01546A6NGU7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01546A6NGU7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.46■□□□□ 0.39
LINC01546A6NGU7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01546A6NGU7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01546A6NGU7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01546A6NGU7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01546A6NGU7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01546A6NGU7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.46■□□□□ 0.39
LINC01546A6NGU7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
LINC01546A6NGU7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01546A6NGU7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
LINC01546A6NGU7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LINC01546A6NGU7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01546A6NGU7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01546A6NGU7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01546A6NGU7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01546A6NGU7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01546A6NGU7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01546A6NGU7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC01546A6NGU7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
LINC01546A6NGU7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.44■□□□□ 0.38
LINC01546A6NGU7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC01546A6NGU7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
LINC01546A6NGU7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01546A6NGU7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01546A6NGU7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LINC01546A6NGU7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01546A6NGU7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01546A6NGU7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01546A6NGU7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.42■□□□□ 0.38
LINC01546A6NGU7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.41■□□□□ 0.38
LINC01546A6NGU7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01546A6NGU7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01546A6NGU7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.41■□□□□ 0.38
LINC01546A6NGU7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01546A6NGU7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01546A6NGU7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01546A6NGU7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01546A6NGU7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01546A6NGU7 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.41■□□□□ 0.38
LINC01546A6NGU7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01546A6NGU7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01546A6NGU7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LINC01546A6NGU7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LINC01546A6NGU7 WHAMMP2-203ENST00000563942 1603 ntBASIC17.4■□□□□ 0.38
LINC01546A6NGU7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01546A6NGU7 AP002365.1-201ENST00000603448 772 ntBASIC17.4■□□□□ 0.38
LINC01546A6NGU7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01546A6NGU7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LINC01546A6NGU7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01546A6NGU7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LINC01546A6NGU7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.39■□□□□ 0.38
LINC01546A6NGU7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LINC01546A6NGU7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.39■□□□□ 0.37
LINC01546A6NGU7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01546A6NGU7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01546A6NGU7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.39■□□□□ 0.37
LINC01546A6NGU7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01546A6NGU7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LINC01546A6NGU7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01546A6NGU7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
LINC01546A6NGU7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC01546A6NGU7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01546A6NGU7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC01546A6NGU7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LINC01546A6NGU7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01546A6NGU7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC01546A6NGU7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01546A6NGU7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01546A6NGU7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01546A6NGU7 AC097639.1-201ENST00000565519 1891 ntBASIC17.37■□□□□ 0.37
LINC01546A6NGU7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LINC01546A6NGU7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC01546A6NGU7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01546A6NGU7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LINC01546A6NGU7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01546A6NGU7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.37■□□□□ 0.37
LINC01546A6NGU7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01546A6NGU7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01546A6NGU7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms