Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV24A0A0B4J272 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV24A0A0B4J272 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV24A0A0B4J272 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV24A0A0B4J272 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV24A0A0B4J272 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAV24A0A0B4J272 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV24A0A0B4J272 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV24A0A0B4J272 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV24A0A0B4J272 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV24A0A0B4J272 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.59■□□□□ 0.89
TRAV24A0A0B4J272 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV24A0A0B4J272 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV24A0A0B4J272 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV24A0A0B4J272 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV24A0A0B4J272 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV24A0A0B4J272 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
TRAV24A0A0B4J272 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV24A0A0B4J272 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV24A0A0B4J272 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TRAV24A0A0B4J272 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TRAV24A0A0B4J272 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRAV24A0A0B4J272 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV24A0A0B4J272 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV24A0A0B4J272 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRAV24A0A0B4J272 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV24A0A0B4J272 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV24A0A0B4J272 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.57■□□□□ 0.88
TRAV24A0A0B4J272 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV24A0A0B4J272 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
TRAV24A0A0B4J272 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV24A0A0B4J272 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV24A0A0B4J272 MIR3648-2-201ENST00000581792 180 ntBASIC20.56■□□□□ 0.88
TRAV24A0A0B4J272 MIR3648-1-201ENST00000615959 180 ntBASIC20.56■□□□□ 0.88
TRAV24A0A0B4J272 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV24A0A0B4J272 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV24A0A0B4J272 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV24A0A0B4J272 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRAV24A0A0B4J272 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.55■□□□□ 0.88
TRAV24A0A0B4J272 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV24A0A0B4J272 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV24A0A0B4J272 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV24A0A0B4J272 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV24A0A0B4J272 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAV24A0A0B4J272 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV24A0A0B4J272 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAV24A0A0B4J272 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAV24A0A0B4J272 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV24A0A0B4J272 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV24A0A0B4J272 AL359258.2-201ENST00000564063 1566 ntBASIC20.54■□□□□ 0.88
TRAV24A0A0B4J272 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TRAV24A0A0B4J272 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAV24A0A0B4J272 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV24A0A0B4J272 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV24A0A0B4J272 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV24A0A0B4J272 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV24A0A0B4J272 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAV24A0A0B4J272 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAV24A0A0B4J272 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
TRAV24A0A0B4J272 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAV24A0A0B4J272 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAV24A0A0B4J272 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.52■□□□□ 0.87
TRAV24A0A0B4J272 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAV24A0A0B4J272 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.51■□□□□ 0.87
TRAV24A0A0B4J272 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV24A0A0B4J272 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.51■□□□□ 0.87
TRAV24A0A0B4J272 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TRAV24A0A0B4J272 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV24A0A0B4J272 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV24A0A0B4J272 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV24A0A0B4J272 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV24A0A0B4J272 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV24A0A0B4J272 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.5■□□□□ 0.87
TRAV24A0A0B4J272 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.5■□□□□ 0.87
TRAV24A0A0B4J272 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV24A0A0B4J272 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV24A0A0B4J272 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRAV24A0A0B4J272 AC016575.1-201ENST00000607026 382 ntBASIC20.49■□□□□ 0.87
TRAV24A0A0B4J272 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRAV24A0A0B4J272 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV24A0A0B4J272 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV24A0A0B4J272 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAV24A0A0B4J272 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.48■□□□□ 0.87
TRAV24A0A0B4J272 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV24A0A0B4J272 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV24A0A0B4J272 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.48■□□□□ 0.87
TRAV24A0A0B4J272 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV24A0A0B4J272 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV24A0A0B4J272 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV24A0A0B4J272 AC020928.2-201ENST00000588717 2197 ntBASIC20.47■□□□□ 0.87
TRAV24A0A0B4J272 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.47■□□□□ 0.87
TRAV24A0A0B4J272 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV24A0A0B4J272 ERN1-208ENST00000606895 2068 ntBASIC20.47■□□□□ 0.87
TRAV24A0A0B4J272 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.47■□□□□ 0.87
TRAV24A0A0B4J272 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV24A0A0B4J272 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV24A0A0B4J272 AL359504.2-201ENST00000605506 1601 ntBASIC20.46■□□□□ 0.87
TRAV24A0A0B4J272 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV24A0A0B4J272 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV24A0A0B4J272 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms