Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV26-1A0A087WT03 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV26-1A0A087WT03 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV26-1A0A087WT03 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV26-1A0A087WT03 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV26-1A0A087WT03 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRAV26-1A0A087WT03 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRAV26-1A0A087WT03 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV26-1A0A087WT03 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV26-1A0A087WT03 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAV26-1A0A087WT03 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV26-1A0A087WT03 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAV26-1A0A087WT03 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV26-1A0A087WT03 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV26-1A0A087WT03 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV26-1A0A087WT03 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV26-1A0A087WT03 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV26-1A0A087WT03 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRAV26-1A0A087WT03 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV26-1A0A087WT03 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
TRAV26-1A0A087WT03 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV26-1A0A087WT03 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV26-1A0A087WT03 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRAV26-1A0A087WT03 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV26-1A0A087WT03 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV26-1A0A087WT03 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV26-1A0A087WT03 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV26-1A0A087WT03 AC126177.7-201ENST00000547904 679 ntBASIC17.5■□□□□ 0.39
TRAV26-1A0A087WT03 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV26-1A0A087WT03 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV26-1A0A087WT03 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRAV26-1A0A087WT03 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV26-1A0A087WT03 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV26-1A0A087WT03 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV26-1A0A087WT03 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV26-1A0A087WT03 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV26-1A0A087WT03 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV26-1A0A087WT03 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV26-1A0A087WT03 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRAV26-1A0A087WT03 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV26-1A0A087WT03 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV26-1A0A087WT03 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV26-1A0A087WT03 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV26-1A0A087WT03 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV26-1A0A087WT03 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV26-1A0A087WT03 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV26-1A0A087WT03 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV26-1A0A087WT03 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV26-1A0A087WT03 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV26-1A0A087WT03 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV26-1A0A087WT03 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV26-1A0A087WT03 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.47■□□□□ 0.39
TRAV26-1A0A087WT03 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.47■□□□□ 0.39
TRAV26-1A0A087WT03 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV26-1A0A087WT03 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV26-1A0A087WT03 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRAV26-1A0A087WT03 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV26-1A0A087WT03 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV26-1A0A087WT03 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV26-1A0A087WT03 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAV26-1A0A087WT03 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV26-1A0A087WT03 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
TRAV26-1A0A087WT03 AL359258.2-201ENST00000564063 1566 ntBASIC17.45■□□□□ 0.38
TRAV26-1A0A087WT03 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV26-1A0A087WT03 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV26-1A0A087WT03 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAV26-1A0A087WT03 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV26-1A0A087WT03 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV26-1A0A087WT03 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV26-1A0A087WT03 AC022413.1-201ENST00000624602 984 ntBASIC17.45■□□□□ 0.38
TRAV26-1A0A087WT03 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
TRAV26-1A0A087WT03 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV26-1A0A087WT03 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRAV26-1A0A087WT03 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV26-1A0A087WT03 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRAV26-1A0A087WT03 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV26-1A0A087WT03 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV26-1A0A087WT03 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV26-1A0A087WT03 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV26-1A0A087WT03 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV26-1A0A087WT03 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.44■□□□□ 0.38
TRAV26-1A0A087WT03 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRAV26-1A0A087WT03 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV26-1A0A087WT03 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRAV26-1A0A087WT03 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV26-1A0A087WT03 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV26-1A0A087WT03 WHAMMP3-201ENST00000611636 1609 ntBASIC17.43■□□□□ 0.38
TRAV26-1A0A087WT03 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV26-1A0A087WT03 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV26-1A0A087WT03 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRAV26-1A0A087WT03 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV26-1A0A087WT03 GPX1-201ENST00000419349 1106 ntBASIC17.43■□□□□ 0.38
TRAV26-1A0A087WT03 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV26-1A0A087WT03 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV26-1A0A087WT03 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV26-1A0A087WT03 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRAV26-1A0A087WT03 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV26-1A0A087WT03 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV26-1A0A087WT03 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV26-1A0A087WT03 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms