Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CYP46A1Q9Y6A2 AC020916.1-201ENST00000587762 1774 ntBASIC21.15■□□□□ 0.98
CYP46A1Q9Y6A2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CYP46A1Q9Y6A2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CYP46A1Q9Y6A2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CYP46A1Q9Y6A2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
CYP46A1Q9Y6A2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.14■□□□□ 0.98
CYP46A1Q9Y6A2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.14■□□□□ 0.98
CYP46A1Q9Y6A2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CYP46A1Q9Y6A2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 AC063952.2-201ENST00000498792 1227 ntBASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 HLA-J-201ENST00000462773 1622 ntBASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
CYP46A1Q9Y6A2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 AC005332.3-201ENST00000589904 676 ntBASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 LINC01451-201ENST00000623792 534 ntBASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 AL138688.1-201ENST00000624851 1594 ntBASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CYP46A1Q9Y6A2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 AC108860.2-201ENST00000562760 2183 ntBASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP46A1Q9Y6A2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.11■□□□□ 0.97
CYP46A1Q9Y6A2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms