Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 TSEN15P1-201ENST00000423257 515 ntBASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 AC116407.2-201ENST00000613639 860 ntBASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN10AQ9Y5Y9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCN10AQ9Y5Y9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.33■□□□□ 0.69
SCN10AQ9Y5Y9 IGHV3-52-201ENST00000519770 353 ntBASIC19.33■□□□□ 0.69
SCN10AQ9Y5Y9 AC068137.2-201ENST00000605408 478 ntBASIC19.33■□□□□ 0.69
SCN10AQ9Y5Y9 LINC02084-201ENST00000606069 1096 ntBASIC19.33■□□□□ 0.69
SCN10AQ9Y5Y9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SCN10AQ9Y5Y9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCN10AQ9Y5Y9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCN10AQ9Y5Y9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SCN10AQ9Y5Y9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.69
SCN10AQ9Y5Y9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
SCN10AQ9Y5Y9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN10AQ9Y5Y9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
SCN10AQ9Y5Y9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
SCN10AQ9Y5Y9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.33■□□□□ 0.68
SCN10AQ9Y5Y9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SCN10AQ9Y5Y9 AC002558.1-201ENST00000488906 803 ntBASIC19.33■□□□□ 0.68
SCN10AQ9Y5Y9 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.33■□□□□ 0.68
SCN10AQ9Y5Y9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN10AQ9Y5Y9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.33■□□□□ 0.68
SCN10AQ9Y5Y9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.33■□□□□ 0.68
SCN10AQ9Y5Y9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.33■□□□□ 0.68
SCN10AQ9Y5Y9 KRT18P28-201ENST00000453838 1332 ntBASIC19.33■□□□□ 0.68
SCN10AQ9Y5Y9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCN10AQ9Y5Y9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 AC096734.2-201ENST00000562054 433 ntBASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN10AQ9Y5Y9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms