Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHB7Q9Y5E2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB7Q9Y5E2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHB7Q9Y5E2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHB7Q9Y5E2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHB7Q9Y5E2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB7Q9Y5E2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHB7Q9Y5E2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB7Q9Y5E2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDHB7Q9Y5E2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB7Q9Y5E2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB7Q9Y5E2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB7Q9Y5E2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB7Q9Y5E2 AL096828.2-201ENST00000567259 1965 ntBASIC19.1■□□□□ 0.65
PCDHB7Q9Y5E2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 AP001160.2-201ENST00000596071 487 ntBASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 AC116407.2-201ENST00000613639 860 ntBASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 AC132938.5-201ENST00000624980 1813 ntBASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB7Q9Y5E2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PCDHB7Q9Y5E2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB7Q9Y5E2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
PCDHB7Q9Y5E2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB7Q9Y5E2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHB7Q9Y5E2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB7Q9Y5E2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHB7Q9Y5E2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB7Q9Y5E2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB7Q9Y5E2 KLF4P1-201ENST00000412782 1185 ntBASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 SIGLEC30P-201ENST00000455569 941 ntBASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 NCF1C-201ENST00000438382 1427 ntBASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB7Q9Y5E2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 CRYGEP-201ENST00000412192 528 ntBASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 AC004967.1-201ENST00000453589 447 ntBASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB7Q9Y5E2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms