Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 LIN28AP1-201ENST00000429574 405 ntBASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
R3HCC1Q9Y3T6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 AC005363.2-201ENST00000618631 242 ntBASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.42■□□□□ 0.86
R3HCC1Q9Y3T6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 ATP5G1P1-201ENST00000448724 379 ntBASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 AL353719.1-201ENST00000566847 864 ntBASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 AL512604.3-201ENST00000569583 964 ntBASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms