Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
RNF11Q9Y3C5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
RNF11Q9Y3C5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.39■□□□□ 0.38
RNF11Q9Y3C5 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
RNF11Q9Y3C5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF11Q9Y3C5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF11Q9Y3C5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.39■□□□□ 0.38
RNF11Q9Y3C5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 AC018695.7-201ENST00000624587 2492 ntBASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 AC113404.2-201ENST00000507884 177 ntBASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 NKILA-202ENST00000614771 2598 ntBASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 AC022898.2-201ENST00000616822 1312 ntBASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF11Q9Y3C5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 AC011676.5-201ENST00000624864 2660 ntBASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 AC211429.1-201ENST00000415277 523 ntBASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 AC117947.1-201ENST00000427448 529 ntBASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF11Q9Y3C5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF11Q9Y3C5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RNF11Q9Y3C5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RNF11Q9Y3C5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF11Q9Y3C5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF11Q9Y3C5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF11Q9Y3C5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF11Q9Y3C5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RNF11Q9Y3C5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF11Q9Y3C5 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF11Q9Y3C5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RNF11Q9Y3C5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RNF11Q9Y3C5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms