Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 FAM201B-201ENST00000458407 597 ntBASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
LRCH1Q9Y2L9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRCH1Q9Y2L9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRCH1Q9Y2L9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRCH1Q9Y2L9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
LRCH1Q9Y2L9 AC060834.1-201ENST00000443027 2032 ntBASIC16.96■□□□□ 0.3
LRCH1Q9Y2L9 AP006587.1-201ENST00000534129 1502 ntBASIC16.96■□□□□ 0.3
LRCH1Q9Y2L9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 HLA-B-256ENST00000639848 1089 ntBASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH1Q9Y2L9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 TSPY20P-201ENST00000450910 630 ntBASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 AC060766.5-201ENST00000590539 871 ntBASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 AC092068.3-201ENST00000587894 2016 ntBASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LRCH1Q9Y2L9 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 MIR4651-201ENST00000582622 73 ntBASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRCH1Q9Y2L9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms