Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.44□□□□□ -0.1
FOXA2Q9Y261 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.44□□□□□ -0.1
FOXA2Q9Y261 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXA2Q9Y261 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
FOXA2Q9Y261 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXA2Q9Y261 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXA2Q9Y261 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.44□□□□□ -0.1
FOXA2Q9Y261 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXA2Q9Y261 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 AL359075.1-203ENST00000462729 1002 ntBASIC14.43□□□□□ -0.1
FOXA2Q9Y261 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 AC100803.2-201ENST00000562459 1963 ntBASIC14.43□□□□□ -0.1
FOXA2Q9Y261 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
FOXA2Q9Y261 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 FAM8A6P-201ENST00000407496 1135 ntBASIC14.42□□□□□ -0.1
FOXA2Q9Y261 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 AL590326.2-201ENST00000625139 305 ntBASIC14.42□□□□□ -0.1
FOXA2Q9Y261 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXA2Q9Y261 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA2Q9Y261 LINC00167-201ENST00000530583 1419 ntBASIC14.41□□□□□ -0.1
FOXA2Q9Y261 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
FOXA2Q9Y261 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA2Q9Y261 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
FOXA2Q9Y261 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA2Q9Y261 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA2Q9Y261 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA2Q9Y261 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
FOXA2Q9Y261 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA2Q9Y261 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA2Q9Y261 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA2Q9Y261 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA2Q9Y261 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA2Q9Y261 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXA2Q9Y261 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA2Q9Y261 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.41□□□□□ -0.1
FOXA2Q9Y261 SPDYE15P-201ENST00000424157 909 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms