Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 AC008687.5-201ENST00000593746 558 ntBASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 AC009949.1-201ENST00000623048 1830 ntBASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CHMP2BQ9UQN3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 HMGA1P5-201ENST00000412453 271 ntBASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 PVRIG2P-201ENST00000435460 978 ntBASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 NEK4P2-201ENST00000580004 1012 ntBASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 MIR4497-201ENST00000583208 89 ntBASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 TMEM191A-211ENST00000637163 1067 ntBASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 AP006294.2-201ENST00000641667 209 ntBASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 AC008894.3-201ENST00000624324 3103 ntBASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 AD000864.1-201ENST00000624076 2295 ntBASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2BQ9UQN3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHMP2BQ9UQN3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHMP2BQ9UQN3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 AL512604.3-201ENST00000569583 964 ntBASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP2BQ9UQN3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms