Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 ATP5G2P1-201ENST00000433580 426 ntBASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 AC012183.1-201ENST00000625197 499 ntBASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGC3Q9UN70 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDHGC3Q9UN70 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGC3Q9UN70 AL138688.1-201ENST00000624851 1594 ntBASIC18.77■□□□□ 0.6
PCDHGC3Q9UN70 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
PCDHGC3Q9UN70 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGC3Q9UN70 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGC3Q9UN70 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGC3Q9UN70 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGC3Q9UN70 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGC3Q9UN70 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.77■□□□□ 0.6
PCDHGC3Q9UN70 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.77■□□□□ 0.6
PCDHGC3Q9UN70 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHGC3Q9UN70 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGC3Q9UN70 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGC3Q9UN70 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGC3Q9UN70 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGC3Q9UN70 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
PCDHGC3Q9UN70 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGC3Q9UN70 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGC3Q9UN70 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.77■□□□□ 0.59
PCDHGC3Q9UN70 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDHGC3Q9UN70 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.59
PCDHGC3Q9UN70 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 TOB2P1-201ENST00000469761 992 ntBASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 AC122714.2-201ENST00000502787 707 ntBASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 AC009533.2-201ENST00000543664 586 ntBASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 Z69720.1-201ENST00000601483 472 ntBASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGC3Q9UN70 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGC3Q9UN70 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms