Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 AC100803.2-201ENST00000562459 1963 ntBASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 AC022898.2-201ENST00000616822 1312 ntBASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.67■■□□□ 1.06
HMG20BQ9P0W2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 AC106795.1-205ENST00000512851 1056 ntBASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 AC068880.1-201ENST00000507289 2297 ntBASIC21.66■■□□□ 1.06
HMG20BQ9P0W2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 AC008608.2-201ENST00000606089 416 ntBASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 AL355877.3-201ENST00000622820 899 ntBASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 AP000997.3-201ENST00000623333 2250 ntBASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 AC018470.1-201ENST00000624790 3129 ntBASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMG20BQ9P0W2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms