Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 GK-202ENST00000378941 458 ntTSL 3 BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 AP002414.1-201ENST00000391405 1147 ntBASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 AC015922.1-201ENST00000421102 1152 ntBASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 FAM86GP-201ENST00000448322 971 ntBASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 REXO1L3P-201ENST00000622202 1288 ntBASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 AL121761.2-201ENST00000598007 1648 ntBASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CXXC1Q9P0U4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 DUX4L27-201ENST00000554796 1261 ntBASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 AC019129.2-201ENST00000609837 1235 ntBASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 GGTLC5P-201ENST00000617623 998 ntBASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 Z92544.3-201ENST00000624747 417 ntBASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 AC092919.2-201ENST00000623631 1645 ntBASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.98■□□□□ 0.63
CXXC1Q9P0U4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 AC068137.2-201ENST00000605408 478 ntBASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 AJ011932.1-201ENST00000621707 465 ntBASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 AC097637.2-201ENST00000624096 1997 ntBASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.97■□□□□ 0.63
CXXC1Q9P0U4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CXXC1Q9P0U4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms