Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 GMCL1P1-201ENST00000463439 1581 ntBASIC18.41■□□□□ 0.54
HPS4Q9NQG7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 ZNF259P1-201ENST00000407656 1365 ntBASIC18.41■□□□□ 0.54
HPS4Q9NQG7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.41■□□□□ 0.54
HPS4Q9NQG7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 AC145285.3-201ENST00000564603 959 ntBASIC18.4■□□□□ 0.54
HPS4Q9NQG7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 TERC-201ENST00000602385 541 ntBASIC18.4■□□□□ 0.54
HPS4Q9NQG7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 PMS2P7-201ENST00000506558 1336 ntBASIC18.4■□□□□ 0.54
HPS4Q9NQG7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS4Q9NQG7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HPS4Q9NQG7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HPS4Q9NQG7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
HPS4Q9NQG7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HPS4Q9NQG7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
HPS4Q9NQG7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 OR7E14P-202ENST00000530490 1290 ntBASIC18.39■□□□□ 0.53
HPS4Q9NQG7 AC092865.5-201ENST00000545435 363 ntBASIC18.39■□□□□ 0.53
HPS4Q9NQG7 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 NKAPP1-205ENST00000585790 367 ntBASIC18.39■□□□□ 0.53
HPS4Q9NQG7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 AL139288.1-201ENST00000623748 933 ntBASIC18.39■□□□□ 0.53
HPS4Q9NQG7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 AC104109.2-201ENST00000602919 1418 ntBASIC18.39■□□□□ 0.53
HPS4Q9NQG7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 CROCCP3-202ENST00000420820 1947 ntBASIC18.39■□□□□ 0.53
HPS4Q9NQG7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HPS4Q9NQG7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms