Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZFYVE28Q9HCC9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 DDX43P3-201ENST00000441064 443 ntBASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 AC023141.5-201ENST00000458585 616 ntBASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 AC109322.1-201ENST00000524499 1264 ntBASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 REXO1L3P-201ENST00000622202 1288 ntBASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 LINC00628-201ENST00000628516 1289 ntBASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.24■□□□□ 0.83
ZFYVE28Q9HCC9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 AC069262.1-201ENST00000539058 672 ntBASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZFYVE28Q9HCC9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 RNA5SP421-201ENST00000516864 134 ntBASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 AC068137.2-201ENST00000605408 478 ntBASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 AL121761.2-201ENST00000598007 1648 ntBASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
ZFYVE28Q9HCC9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.21■□□□□ 0.83
ZFYVE28Q9HCC9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms