Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 AL391807.1-203ENST00000604392 2365 ntBASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 HLA-J-201ENST00000462773 1622 ntBASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 LIN28AP1-201ENST00000429574 405 ntBASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 AL136038.4-201ENST00000603606 1261 ntBASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
LRTM1Q9HBL6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
LRTM1Q9HBL6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 ATP5G1P1-201ENST00000448724 379 ntBASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 AC079602.3-201ENST00000623931 403 ntBASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 AL031432.5-201ENST00000641059 760 ntBASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 AC106820.2-201ENST00000563775 3264 ntBASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LRTM1Q9HBL6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 DDX43P3-201ENST00000441064 443 ntBASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 COX11P1-201ENST00000489116 835 ntBASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 AC010203.1-204ENST00000548782 407 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms