Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 AC233702.3-201ENST00000578656 1387 ntBASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 SART3-203ENST00000546611 1184 ntBASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 Z69720.1-201ENST00000601483 472 ntBASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 IGHV3-41-201ENST00000613121 348 ntBASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 ANKRD26P3-201ENST00000454044 2748 ntBASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SCAF1Q9H7N4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 PCDH8P1-201ENST00000428983 2773 ntBASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 ADAM3B-201ENST00000569937 840 ntBASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 AL049840.3-201ENST00000602669 611 ntBASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 AL136038.4-201ENST00000603606 1261 ntBASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SCAF1Q9H7N4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 KRT8P41-201ENST00000533985 1514 ntBASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 RPSAP43-201ENST00000402237 625 ntBASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCAF1Q9H7N4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 MIR662-201ENST00000384847 95 ntBASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 GPX1P2-201ENST00000429271 606 ntBASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 HLA-F-220ENST00000434407 884 ntBASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 AC004967.1-201ENST00000453589 447 ntBASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms