Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.91■□□□□ 0.14
NELFAQ9H3P2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 LINC00602-201ENST00000629776 2065 ntBASIC15.9■□□□□ 0.14
NELFAQ9H3P2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NELFAQ9H3P2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 GNAS-203ENST00000306120 1878 ntBASIC15.89■□□□□ 0.13
NELFAQ9H3P2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NELFAQ9H3P2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NELFAQ9H3P2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.88■□□□□ 0.13
NELFAQ9H3P2 AL353692.3-201ENST00000407031 1396 ntBASIC15.88■□□□□ 0.13
NELFAQ9H3P2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NELFAQ9H3P2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NELFAQ9H3P2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.88■□□□□ 0.13
NELFAQ9H3P2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NELFAQ9H3P2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NELFAQ9H3P2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NELFAQ9H3P2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms