Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 AC005082.1-201ENST00000413042 2259 ntBASIC19.9■□□□□ 0.78
RNF39Q9H2S5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RNF39Q9H2S5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.89■□□□□ 0.78
RNF39Q9H2S5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RNF39Q9H2S5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
RNF39Q9H2S5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 MIR149-201ENST00000384879 89 ntBASIC19.89■□□□□ 0.77
RNF39Q9H2S5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 LIPT1P1-201ENST00000415870 1186 ntBASIC19.89■□□□□ 0.77
RNF39Q9H2S5 AK3P5-201ENST00000432033 519 ntBASIC19.89■□□□□ 0.77
RNF39Q9H2S5 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 AP006222.1-201ENST00000442116 1292 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 PGM5P4-AS1-204ENST00000450636 537 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 AC005351.1-201ENST00000511152 786 ntBASIC19.89■□□□□ 0.77
RNF39Q9H2S5 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 PRELID1P1-202ENST00000567272 903 ntBASIC19.89■□□□□ 0.77
RNF39Q9H2S5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 TP73-AS1-207ENST00000624167 988 ntBASIC19.89■□□□□ 0.77
RNF39Q9H2S5 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF39Q9H2S5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 AL353692.3-201ENST00000407031 1396 ntBASIC19.88■□□□□ 0.77
RNF39Q9H2S5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 TPTE2P3-201ENST00000441562 1189 ntBASIC19.88■□□□□ 0.77
RNF39Q9H2S5 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 AP000688.3-201ENST00000445464 348 ntTSL 3 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 HSPA8P3-201ENST00000449300 780 ntBASIC19.88■□□□□ 0.77
RNF39Q9H2S5 MTND1P27-201ENST00000451117 902 ntBASIC19.88■□□□□ 0.77
RNF39Q9H2S5 RN7SL606P-201ENST00000472779 293 ntBASIC19.88■□□□□ 0.77
RNF39Q9H2S5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 AC090616.6-201ENST00000582640 721 ntBASIC19.88■□□□□ 0.77
RNF39Q9H2S5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 AC107905.1-201ENST00000616204 426 ntBASIC19.88■□□□□ 0.77
RNF39Q9H2S5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF39Q9H2S5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 TTTY7-201ENST00000276770 1367 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 TTTY7B-201ENST00000276779 1367 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 MED20-203ENST00000409060 815 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 APCDD1L-AS1-204ENST00000427794 461 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 AL645638.1-201ENST00000440519 361 ntBASIC19.87■□□□□ 0.77
RNF39Q9H2S5 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 PDE4D-209ENST00000502575 1040 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 AC074051.4-201ENST00000564888 892 ntBASIC19.87■□□□□ 0.77
RNF39Q9H2S5 AC010735.1-201ENST00000567305 1026 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms