Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 BX276092.7-203ENST00000637198 1536 ntBASIC21.14■□□□□ 0.98
CRNKL1Q9BZJ0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.14■□□□□ 0.98
CRNKL1Q9BZJ0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CRNKL1Q9BZJ0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.14■□□□□ 0.98
CRNKL1Q9BZJ0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 AC018712.1-201ENST00000455767 687 ntBASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 AC079776.4-201ENST00000511039 504 ntBASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 AC148477.8-201ENST00000624298 468 ntBASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 SIRPAP1-201ENST00000448467 1770 ntBASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CRNKL1Q9BZJ0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 AP001005.1-201ENST00000571755 1248 ntBASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRNKL1Q9BZJ0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 AL031284.1-201ENST00000419297 478 ntBASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 RNA5SP419-201ENST00000515908 135 ntBASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 AC021087.4-201ENST00000563761 564 ntBASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.12■□□□□ 0.97
CRNKL1Q9BZJ0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRNKL1Q9BZJ0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.11■□□□□ 0.97
CRNKL1Q9BZJ0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CRNKL1Q9BZJ0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRNKL1Q9BZJ0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.11■□□□□ 0.97
CRNKL1Q9BZJ0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRNKL1Q9BZJ0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRNKL1Q9BZJ0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CRNKL1Q9BZJ0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.11■□□□□ 0.97
CRNKL1Q9BZJ0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
CRNKL1Q9BZJ0 NKAPP1-205ENST00000585790 367 ntBASIC21.11■□□□□ 0.97
CRNKL1Q9BZJ0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.11■□□□□ 0.97
CRNKL1Q9BZJ0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.11■□□□□ 0.97
CRNKL1Q9BZJ0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRNKL1Q9BZJ0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRNKL1Q9BZJ0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CRNKL1Q9BZJ0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.11■□□□□ 0.97
CRNKL1Q9BZJ0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms