Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
THUMPD3Q9BV44 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD3Q9BV44 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD3Q9BV44 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD3Q9BV44 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.06■□□□□ 0.32
THUMPD3Q9BV44 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
THUMPD3Q9BV44 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
THUMPD3Q9BV44 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD3Q9BV44 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
THUMPD3Q9BV44 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD3Q9BV44 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD3Q9BV44 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.06■□□□□ 0.32
THUMPD3Q9BV44 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
THUMPD3Q9BV44 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
THUMPD3Q9BV44 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD3Q9BV44 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.06■□□□□ 0.32
THUMPD3Q9BV44 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 TSPY14P-201ENST00000303979 915 ntBASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 DUTP2-201ENST00000519164 463 ntBASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 BX088651.1-201ENST00000540551 451 ntBASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 MIR3180-4-201ENST00000582223 153 ntBASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 AC010947.1-201ENST00000623454 693 ntBASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 AP001094.4-201ENST00000579008 2176 ntBASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
THUMPD3Q9BV44 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 AC092338.2-201ENST00000568827 1415 ntBASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 AC100803.2-201ENST00000562459 1963 ntBASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 AC007663.1-201ENST00000438948 1240 ntBASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 EGLN1P1-201ENST00000531623 762 ntBASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 AC084018.2-201ENST00000613093 2607 ntBASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD3Q9BV44 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
THUMPD3Q9BV44 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
THUMPD3Q9BV44 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
THUMPD3Q9BV44 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms