Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHRDL1Q9BU40 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHRDL1Q9BU40 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.19□□□□□ -0.14
CHRDL1Q9BU40 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHRDL1Q9BU40 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHRDL1Q9BU40 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHRDL1Q9BU40 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHRDL1Q9BU40 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHRDL1Q9BU40 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHRDL1Q9BU40 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHRDL1Q9BU40 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CHRDL1Q9BU40 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHRDL1Q9BU40 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHRDL1Q9BU40 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHRDL1Q9BU40 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.19□□□□□ -0.14
CHRDL1Q9BU40 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.19□□□□□ -0.14
CHRDL1Q9BU40 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.19□□□□□ -0.14
CHRDL1Q9BU40 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 AL096828.2-201ENST00000567259 1965 ntBASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 ECEL1P3-201ENST00000427961 737 ntBASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 AC009065.1-201ENST00000564055 1225 ntBASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.18□□□□□ -0.14
CHRDL1Q9BU40 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 FLJ16779-201ENST00000612722 7638 ntBASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 NEK4P2-201ENST00000580004 1012 ntBASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 MIR3180-4-201ENST00000582223 153 ntBASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms