Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
YIPF4Q9BSR8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 UPK3BP1-201ENST00000428678 509 ntBASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 DUTP2-201ENST00000519164 463 ntBASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.8■□□□□ 0.28
YIPF4Q9BSR8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 FAM8A6P-201ENST00000407496 1135 ntBASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 HLA-F-220ENST00000434407 884 ntBASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 KRT18P48-201ENST00000434763 852 ntBASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 AC112907.2-201ENST00000448639 330 ntBASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.79■□□□□ 0.28
YIPF4Q9BSR8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF4Q9BSR8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms