Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
VGLL1Q99990 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 UNC93B2-201ENST00000285383 730 ntBASIC13.54□□□□□ -0.24
VGLL1Q99990 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.54□□□□□ -0.24
VGLL1Q99990 CCR12P-201ENST00000446203 998 ntBASIC13.54□□□□□ -0.24
VGLL1Q99990 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.54□□□□□ -0.24
VGLL1Q99990 BX088651.1-201ENST00000540551 451 ntBASIC13.54□□□□□ -0.24
VGLL1Q99990 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
VGLL1Q99990 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.54□□□□□ -0.24
VGLL1Q99990 MIR3180-4-201ENST00000582223 153 ntBASIC13.54□□□□□ -0.24
VGLL1Q99990 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
VGLL1Q99990 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 AC092338.2-201ENST00000568827 1415 ntBASIC13.54□□□□□ -0.24
VGLL1Q99990 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.54□□□□□ -0.24
VGLL1Q99990 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
VGLL1Q99990 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VGLL1Q99990 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
VGLL1Q99990 MST1L-201ENST00000442552 2185 ntBASIC13.54□□□□□ -0.24
VGLL1Q99990 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.54□□□□□ -0.24
VGLL1Q99990 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VGLL1Q99990 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
VGLL1Q99990 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VGLL1Q99990 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
VGLL1Q99990 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VGLL1Q99990 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.53□□□□□ -0.24
VGLL1Q99990 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.53□□□□□ -0.24
VGLL1Q99990 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.53□□□□□ -0.24
VGLL1Q99990 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VGLL1Q99990 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VGLL1Q99990 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
VGLL1Q99990 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VGLL1Q99990 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.53□□□□□ -0.24
VGLL1Q99990 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
VGLL1Q99990 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VGLL1Q99990 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VGLL1Q99990 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
VGLL1Q99990 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
VGLL1Q99990 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
VGLL1Q99990 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
VGLL1Q99990 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VGLL1Q99990 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.53□□□□□ -0.24
VGLL1Q99990 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.53□□□□□ -0.24
VGLL1Q99990 RBM17P1-201ENST00000453646 1190 ntBASIC13.53□□□□□ -0.24
VGLL1Q99990 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.53□□□□□ -0.24
VGLL1Q99990 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.53□□□□□ -0.24
VGLL1Q99990 DUTP2-201ENST00000519164 463 ntBASIC13.53□□□□□ -0.24
VGLL1Q99990 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.53□□□□□ -0.24
VGLL1Q99990 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.53□□□□□ -0.24
VGLL1Q99990 Z99916.2-201ENST00000604037 246 ntBASIC13.53□□□□□ -0.24
VGLL1Q99990 AC010240.3-201ENST00000607688 395 ntBASIC13.53□□□□□ -0.24
VGLL1Q99990 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VGLL1Q99990 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
VGLL1Q99990 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VGLL1Q99990 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VGLL1Q99990 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
VGLL1Q99990 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
VGLL1Q99990 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VGLL1Q99990 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VGLL1Q99990 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VGLL1Q99990 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VGLL1Q99990 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VGLL1Q99990 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
VGLL1Q99990 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.53□□□□□ -0.24
VGLL1Q99990 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
VGLL1Q99990 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.53□□□□□ -0.24
VGLL1Q99990 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.52□□□□□ -0.24
VGLL1Q99990 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
VGLL1Q99990 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
VGLL1Q99990 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VGLL1Q99990 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VGLL1Q99990 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VGLL1Q99990 AD000864.1-201ENST00000624076 2295 ntBASIC13.52□□□□□ -0.24
VGLL1Q99990 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.24
VGLL1Q99990 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
VGLL1Q99990 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VGLL1Q99990 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.52□□□□□ -0.24
VGLL1Q99990 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
VGLL1Q99990 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
VGLL1Q99990 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VGLL1Q99990 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VGLL1Q99990 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.52□□□□□ -0.25
VGLL1Q99990 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.52□□□□□ -0.25
VGLL1Q99990 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
VGLL1Q99990 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.52□□□□□ -0.25
VGLL1Q99990 AL390955.1-201ENST00000428694 934 ntBASIC13.52□□□□□ -0.25
VGLL1Q99990 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.52□□□□□ -0.25
VGLL1Q99990 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms